RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 HSD17B10Q99714 261 aaKnown RBP18.21■□□□□ 0.51
ATG4D-209ENST00000588857 TMEM222Q9H0R3 208 aa18.21■□□□□ 0.51
ATG4D-209ENST00000588857 LIN7CQ9NUP9 197 aaKnown RBP18.21■□□□□ 0.51
ATG4D-209ENST00000588857 IGHV2-70DA0A0C4DH43 119 aa18.2■□□□□ 0.5
ATG4D-209ENST00000588857 J3QR06 171 aa18.2■□□□□ 0.5
ATG4D-209ENST00000588857 TOR1AO14656 332 aa18.2■□□□□ 0.5
ATG4D-209ENST00000588857 USF1P22415 310 aaPredicted RBP18.2■□□□□ 0.5
ATG4D-209ENST00000588857 C2orf68Q2NKX9 166 aa18.2■□□□□ 0.5
ATG4D-209ENST00000588857 ZNF66Q6ZN08 573 aa18.2■□□□□ 0.5
ATG4D-209ENST00000588857 LGI3Q8N145 548 aa18.2■□□□□ 0.5
ATG4D-209ENST00000588857 ST6GAL2Q96JF0 529 aa18.2■□□□□ 0.5
ATG4D-209ENST00000588857 ZNF436Q9C0F3 470 aaPredicted RBP18.2■□□□□ 0.5
ATG4D-209ENST00000588857 METTL8Q9H825 291 aaKnown RBP18.2■□□□□ 0.5
ATG4D-209ENST00000588857 RANGRFQ9HD47 186 aaPredicted RBP18.2■□□□□ 0.5
ATG4D-209ENST00000588857 SAA2-SAA4A0A096LPE2 208 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 DBX1A6NMT0 343 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 FAM157AC9JC47 383 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 M0R1X1 148 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 SAA2P0DJI9 122 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-209ENST00000588857 PAX2Q02962 417 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 CD300CQ08708 224 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 EIF4EBP1Q13541 118 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-209ENST00000588857 RPL39P5Q59GN2 51 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 C1orf122Q6ZSJ8 110 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 LINC00311Q8N616 119 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 Q8N7P7 452 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 OR10X1Q8NGY0 326 aa18.19■□□□□ 0.5
ATG4D-209ENST00000588857 SERPINE2P07093 398 aa18.18■□□□□ 0.5
ATG4D-209ENST00000588857 PRRX1P54821 245 aa18.18■□□□□ 0.5
ATG4D-209ENST00000588857 ZNF596Q8TC21 504 aa18.18■□□□□ 0.5
ATG4D-209ENST00000588857 PPP1R14BQ96C90 147 aa18.18■□□□□ 0.5
ATG4D-209ENST00000588857 MSI2Q96DH6 328 aaKnown RBP18.18■□□□□ 0.5
ATG4D-209ENST00000588857 S1PR3Q99500 378 aa18.18■□□□□ 0.5
ATG4D-209ENST00000588857 CLEC7AQ9BXN2 247 aa18.18■□□□□ 0.5
ATG4D-209ENST00000588857 RAB18Q9NP72 206 aa18.18■□□□□ 0.5
ATG4D-209ENST00000588857 POLR3KQ9Y2Y1 108 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-209ENST00000588857 KPTNQ9Y664 436 aa18.18■□□□□ 0.5
ATG4D-209ENST00000588857 ABCA2Q9BZC7 2435 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 IGHV2-26A0A0B4J1V2 119 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 HLA-GP17693 338 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 UCP1P25874 307 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 Q5PR19 223 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 ZNF695Q8IW36 515 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 ODF3L1Q8IXM7 274 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 LRTM2Q8N967 370 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 OR5M8Q8NGP6 311 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 OR13D1Q8NGV5 346 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 TCTEX1D2Q8WW35 142 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 TNFRSF14Q92956 283 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 CHIAQ9BZP6 476 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 LPAR2Q9HBW0 351 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 MMP26Q9NRE1 261 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 ZNRD1Q9P1U0 126 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 FAM25EA8MYX2 175 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 SIX6O95475 246 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 COX7A1P24310 79 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 PRRC2AP48634 2157 aaKnown RBP18.17■□□□□ 0.5
ATG4D-209ENST00000588857 FYTTD1Q96QD9 318 aaKnown RBP18.17■□□□□ 0.5
ATG4D-209ENST00000588857 SIRT7Q9NRC8 400 aa18.17■□□□□ 0.5
ATG4D-209ENST00000588857 PIGBOS1A0A0B4J2F0 54 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 CCSO14618 274 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 PROP1O75360 226 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 ADAP1O75689 374 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 CDS2O95674 445 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 IFNA21P01568 189 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 HNRNPCP07910 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
ATG4D-209ENST00000588857 HOXB5P09067 269 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 PRTN3P24158 256 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 IL3RAP26951 378 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 DUTP33316 252 aaKnown RBP18.16■□□□□ 0.5
ATG4D-209ENST00000588857 DLX1P56177 255 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 H2BFSP57053 126 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 RPL30P62888 115 aaKnown RBP18.16■□□□□ 0.5
ATG4D-209ENST00000588857 TMEM268Q5VZI3 342 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 TCTEX1D1Q8N7M0 179 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 DRAXINQ8NBI3 349 aaPredicted RBP18.16■□□□□ 0.5
ATG4D-209ENST00000588857 TMEM56Q96MV1 263 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 HEXA-AS1Q9H8Q6 139 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 TMEM56-RWDD3S4R434 201 aa18.16■□□□□ 0.5
ATG4D-209ENST00000588857 C13orf42A0A1B0GVH6 325 aa18.15■□□□□ 0.5
ATG4D-209ENST00000588857 C5orf51A6NDU8 294 aa18.15■□□□□ 0.5
ATG4D-209ENST00000588857 DCAF12L2Q5VW00 463 aa18.15■□□□□ 0.5
ATG4D-209ENST00000588857 PRSS57Q6UWY2 283 aa18.15■□□□□ 0.5
ATG4D-209ENST00000588857 GSG1LQ6UXU4 331 aa18.15■□□□□ 0.5
ATG4D-209ENST00000588857 PNKDQ8N490 385 aa18.15■□□□□ 0.5
ATG4D-209ENST00000588857 ZNF251Q9BRH9 671 aa18.15■□□□□ 0.5
ATG4D-209ENST00000588857 PDCD10Q9BUL8 212 aa18.15■□□□□ 0.5
ATG4D-209ENST00000588857 LINC00473A8K010 186 aa18.14■□□□□ 0.49
ATG4D-209ENST00000588857 GIPP09681 153 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-209ENST00000588857 DVL1P1P54792 670 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-209ENST00000588857 PRB3Q04118 309 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-209ENST00000588857 OR2B11Q5JQS5 317 aa18.14■□□□□ 0.49
ATG4D-209ENST00000588857 VMO1Q7Z5L0 202 aa18.14■□□□□ 0.49
ATG4D-209ENST00000588857 TCTE3Q8IZS6 198 aa18.14■□□□□ 0.49
ATG4D-209ENST00000588857 BEND2Q8NDZ0 799 aa18.14■□□□□ 0.49
ATG4D-209ENST00000588857 LHFPL5Q8TAF8 219 aa18.14■□□□□ 0.49
ATG4D-209ENST00000588857 ASB13Q8WXK3 278 aa18.14■□□□□ 0.49
ATG4D-209ENST00000588857 IL22RA2Q969J5 263 aa18.14■□□□□ 0.49
ATG4D-209ENST00000588857 TMEM186Q96B77 213 aa18.14■□□□□ 0.49
ATG4D-209ENST00000588857 ADTRPQ96IZ2 230 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms