RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 FAM90A23PA8MXZ1 464 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 MCRIP1C9JLW8 97 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 ZNF701M0R085 212 aaPredicted RBP8.98□□□□□ -0.97
LIG3-207ENST00000586119 SPINT2O43291 252 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 LANCL1O43813 399 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 SAP30O75446 220 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 OR8U8P0C7N1 319 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 ARSBP15848 533 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 PPP1CCP36873 323 aaKnown RBP8.98□□□□□ -0.97
LIG3-207ENST00000586119 OR10A3P58181 314 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 NCS1P62166 190 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 LSM3P62310 102 aaKnown RBP8.98□□□□□ -0.97
LIG3-207ENST00000586119 NDPQ00604 133 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 RUNX1Q01196 453 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 SFXN4Q6P4A7 337 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 TMEM65Q6PI78 240 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 PTX4Q96A99 478 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 FAM3DQ96BQ1 224 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 LYSTQ99698 3801 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 RNF167Q9H6Y7 350 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 TPSG1Q9NRR2 321 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 TNCP24821 2201 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 IGHV4OR15-8A0A075B7B6 117 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 A0A087WW49 117 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 SMIM31A0A1B0GVY4 71 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 TMEM14DPA8MWL7 114 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 FCN1O00602 326 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 CRTAPO75718 401 aaPredicted RBP8.97□□□□□ -0.97
LIG3-207ENST00000586119 EGR2P11161 476 aaPredicted RBP8.97□□□□□ -0.97
LIG3-207ENST00000586119 GP9P14770 177 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 MGMTP16455 207 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 RPS19P39019 145 aaKnown RBP8.97□□□□□ -0.97
LIG3-207ENST00000586119 SERPINB10P48595 397 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 VBP1P61758 197 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 QRFPP83859 136 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 MXD1Q05195 221 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 ECSCRQ19T08 205 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 Q3ZCU0 254 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 HES5Q5TA89 166 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 NR2C2APQ86WQ0 139 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 GAPTQ8N292 157 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 MINDY2Q8NBR6 621 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 ARPC1AQ92747 370 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
LIG3-207ENST00000586119 ZNF251Q9BRH9 671 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 URM1Q9BTM9 101 aaKnown RBP8.97□□□□□ -0.97
LIG3-207ENST00000586119 TM2D1Q9BX74 207 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 SELENOIQ9C0D9 397 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 NAA50Q9GZZ1 169 aaKnown RBP8.97□□□□□ -0.97
LIG3-207ENST00000586119 SPACA1Q9HBV2 294 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 ABRACLQ9P1F3 81 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 ZNF580Q9UK33 172 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 CEPT1Q9Y6K0 416 aa8.97□□□□□ -0.97
LIG3-207ENST00000586119 A0A1W2PN81 502 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 LDLRAD4O15165 306 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 NBR2O15453 112 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 TXNL1O43396 289 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 IGHV3-11P01762 117 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 HLA-DRB1P01911 266 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 GLAP06280 429 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 CLEC2LP0C7M8 214 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 OR5H8P0DN80 308 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 RAB6AP20340 208 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 CHRNA7P36544 502 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 RORCP51449 518 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 INSL3P51460 131 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 P2RY14Q15391 338 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 SRSF7Q16629 238 aaKnown RBP eCLIP8.96□□□□□ -0.98
LIG3-207ENST00000586119 C5orf64Q2M2E5 130 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 C2orf76Q3KRA6 126 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 C19orf54Q5BKX5 351 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 C6orf183Q5T699 404 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 LIN54Q6MZP7 749 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 GLDNQ6ZMI3 551 aaPredicted RBP8.96□□□□□ -0.98
LIG3-207ENST00000586119 ZNF429Q86V71 674 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 MRPL30Q8TCC3 161 aaKnown RBP8.96□□□□□ -0.98
LIG3-207ENST00000586119 SLC25A46Q96AG3 418 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 Q96M66 194 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 ABHD14AQ9BUJ0 271 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 TMEM59Q9BXS4 323 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 TOLLIPQ9H0E2 274 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 DCSTAMPQ9H295 470 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 FBXL15Q9H469 300 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 DAPK2Q9UIK4 370 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 RAB22AQ9UL26 194 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 GAB2Q9UQC2 676 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 ETV7Q9Y603 341 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 A3GALT2U3KPV4 340 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 CSMD3Q7Z407 3707 aa8.96□□□□□ -0.98
LIG3-207ENST00000586119 LYL1P12980 280 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 TGFBR1P36897 503 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 RPS27AP62979 156 aaKnown RBP8.95□□□□□ -0.98
LIG3-207ENST00000586119 STEAP3Q658P3 488 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 ACSM6Q6P461 480 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 Q8N1Y9 231 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 FAM89BQ8N5H3 189 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 NPBQ8NG41 125 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 ACOT12Q8WYK0 555 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 FAM46BQ96A09 425 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 ISOC1Q96CN7 298 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms