RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CIARTQ8N365 385 aaPredicted RBP10.53□□□□□ -0.72
TRIM47-202ENST00000585333 OR4P4Q8NGL7 312 aa10.53□□□□□ -0.72
TRIM47-202ENST00000585333 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
TRIM47-202ENST00000585333 GPN1Q9HCN4 374 aaPredicted RBP10.53□□□□□ -0.72
TRIM47-202ENST00000585333 SLC2A9Q9NRM0 540 aa10.53□□□□□ -0.72
TRIM47-202ENST00000585333 NUDT15Q9NV35 164 aa10.53□□□□□ -0.72
TRIM47-202ENST00000585333 CR1P17927 2039 aa10.53□□□□□ -0.72
TRIM47-202ENST00000585333 SAA2-SAA4A0A096LPE2 208 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 TEX13DA0A0J9YY54 714 aaPredicted RBP10.52□□□□□ -0.73
TRIM47-202ENST00000585333 HSD17B6O14756 317 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 PEX14O75381 377 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 FBP1P09467 338 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 H2AFB2P0C5Z0 115 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 SAA2P0DJI9 122 aaPredicted RBP10.52□□□□□ -0.73
TRIM47-202ENST00000585333 GNRHRP30968 328 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 BTCP35070 178 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 PIGPP57054 158 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 AANATQ16613 207 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 DHRS7BQ6IAN0 325 aaPredicted RBP10.52□□□□□ -0.73
TRIM47-202ENST00000585333 DRAM1Q8N682 238 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 RTN4IP1Q8WWV3 396 aaPredicted RBP10.52□□□□□ -0.73
TRIM47-202ENST00000585333 LEAP2Q969E1 77 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 MS4A7Q9GZW8 240 aaPredicted RBP10.52□□□□□ -0.73
TRIM47-202ENST00000585333 YAE1D1Q9NRH1 226 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 CDC42EP3Q9UKI2 254 aa10.52□□□□□ -0.73
TRIM47-202ENST00000585333 MAP1AP78559 2803 aaPredicted RBP10.52□□□□□ -0.73
TRIM47-202ENST00000585333 IGKV1D-13A0A0B4J2D9 117 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 M0R1X1 148 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 RBFOX2O43251 390 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRIM47-202ENST00000585333 IGKV1-13P0DP09 117 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 RPA2P15927 270 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 SAA4P35542 130 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 SRP14P37108 136 aaKnown RBP10.51□□□□□ -0.73
TRIM47-202ENST00000585333 MECP2P51608 486 aaKnown RBP10.51□□□□□ -0.73
TRIM47-202ENST00000585333 ZNF134P52741 427 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 DHODHQ02127 395 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 TPTE2P1Q5T6R2 138 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 HCP5Q6MZN7 132 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 ZNF818PQ6ZRF7 136 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 C9orf139Q6ZV77 190 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 TMED4Q7Z7H5 227 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 SLC25A42Q86VD7 318 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 CHPT1Q8WUD6 406 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 ST6GALNAC6Q969X2 333 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 ABHD14BQ96IU4 210 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 MARVELD1Q9BSK0 173 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 OCEL1Q9H607 264 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 CCL28Q9NRJ3 127 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 SDHAF2Q9NX18 166 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 RNF150Q9ULK6 438 aa10.51□□□□□ -0.73
TRIM47-202ENST00000585333 WNK2Q9Y3S1 2297 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 INMT-MINDY4F8WBC2 141 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 ARPC1BO15143 372 aaKnown RBP10.5□□□□□ -0.73
TRIM47-202ENST00000585333 SLC31A2O15432 143 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 MPPED1O15442 326 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 IGHV3-7P01780 117 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 F2RP25116 425 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 BAMBIQ13145 260 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 KLRD1Q13241 179 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 OXA1LQ15070 435 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 CCBE1Q6UXH8 406 aaPredicted RBP10.5□□□□□ -0.73
TRIM47-202ENST00000585333 CLEC9AQ6UXN8 241 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 PDPNQ86YL7 162 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 OR4S2Q8NH73 311 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 TCTEX1D2Q8WW35 142 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 GALNT14Q96FL9 552 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 PARP12Q9H0J9 701 aaKnown RBP10.5□□□□□ -0.73
TRIM47-202ENST00000585333 C5orf66Q9H5L9 145 aa10.5□□□□□ -0.73
TRIM47-202ENST00000585333 ITPR3Q14573 2671 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 A0A1W2PPE3 182 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 BTBD17A6NE02 478 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 CRYM-AS1A6NIL9 109 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 H0Y980 276 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 LY6LH3BQJ8 138 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 PGLYRP1O75594 196 aaPredicted RBP10.49□□□□□ -0.73
TRIM47-202ENST00000585333 FSHBP01225 129 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 IFNA2P01563 188 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 IL5P05113 134 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 SERPINE2P07093 398 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 AKR1C4P17516 323 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 DUTP33316 252 aaKnown RBP10.49□□□□□ -0.73
TRIM47-202ENST00000585333 DYNLT3P51808 116 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 RAB25P57735 213 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 PHLDA2Q53GA4 152 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 FAM120AOSQ5T036 256 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 C5orf24Q7Z6I8 188 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 TBC1D26Q86UD7 250 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 ODF3L1Q8IXM7 274 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 COQ8AQ8NI60 647 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 RNF5Q99942 180 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 NAA60Q9H7X0 242 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 PITPNC1Q9UKF7 332 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 VSIG4Q9Y279 399 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 WASHC3Q9Y3C0 194 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 MED13LQ71F56 2210 aa10.49□□□□□ -0.73
TRIM47-202ENST00000585333 ABCA2Q9BZC7 2435 aa10.48□□□□□ -0.73
TRIM47-202ENST00000585333 ABCA1O95477 2261 aa10.48□□□□□ -0.73
TRIM47-202ENST00000585333 TRAV6A0A075B6T7 132 aa10.48□□□□□ -0.73
TRIM47-202ENST00000585333 IGHV1-3A0A0C4DH29 117 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms