RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 KCNIP1Q9NZI2 227 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZNF729A6NN14 1252 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PSPNO60542 156 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 HAND1O96004 215 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SPCS3P61009 180 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 EIF4EBP1Q13541 118 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 MSMO1Q15800 293 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 FAM180AQ6UWF9 173 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 GALMQ96C23 342 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 DEFB127Q9H1M4 99 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 NAT8Q9UHE5 227 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 KIAA2026Q5HYC2 2103 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 IGHV3-64DA0A0J9YX35 117 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 C1QTNF9BB2RNN3 333 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PTBP3O95758 552 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 KRASP01116 189 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 GABRA6Q16445 453 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CDPF1Q6NVV7 123 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CYP2G1PQ6ZSU1 146 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR1L1Q8NH94 360 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 C5orf30Q96GV9 206 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SMIM7Q9BQ49 75 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR2D2Q9H210 308 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 HES4Q9HCC6 221 aa11.93□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TMEM30CPA0ZSE6 113 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 LRRC30A6NM36 301 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 IQCF6A8MYZ5 107 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 C12orf77C9JDV5 145 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 G6PCP35575 357 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR3A1P47881 315 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CEBPDP49716 269 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 IDH3GP51553 393 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 RPL30P62888 115 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ATP6V1FQ16864 119 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ACSM6Q6P461 480 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SLC25A40Q8TBP6 338 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CDH20Q9HBT6 801 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SPRR3Q9UBC9 169 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 IL17BQ9UHF5 180 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR5H1A6NKK0 313 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TMEM210A6NLX4 147 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 GRPP07492 148 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CD55P08174 381 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SELEP16581 610 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PSG7Q13046 419 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PDZD11Q5EBL8 140 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZNF383Q8NA42 475 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZDBF2Q9HCK1 2354 aa11.92□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ODAMA1E959 279 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PMS2P5A8MQ11 134 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TMEM250H0YL14 139 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 KBTBD11O94819 623 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 RD3LP0DJH9 198 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 HOXC12P31275 282 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 MPLP40238 635 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 BRWD1-AS2P59051 145 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TMEM241Q24JQ0 296 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 NCR3LG1Q68D85 454 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TMEM147Q9BVK8 224 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CLN8Q9UBY8 286 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TRGV5A0A0B4J1U4 118 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CTXND1A0A1B0GTU2 59 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OOEPA6NGQ2 149 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CD46P15529 392 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 HIST1H1BP16401 226 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 IL2RGP31785 369 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZNF816Q0VGE8 651 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ADIRFQ15847 76 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 C4orf17Q53FE4 359 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 RNFT1Q5M7Z0 435 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SLC35E4Q6ICL7 350 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR52L2PQ8NGH6 319 aa11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 MRPL37Q9BZE1 423 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-237ENST00000585163 DIDO1Q9BTC0 2240 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 MBP02144 154 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PSMB3P49720 205 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 UBE2NP61088 152 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TGFBR3Q03167 851 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CATR1Q13166 79 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 HNF4GQ14541 408 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 FAM53AQ6NSI3 398 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR10A7Q8NGE5 316 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 GMPPAQ96IJ6 420 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 FER1L6-AS2Q96M78 137 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ARRDC1-AS1Q9H2J1 176 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PRDM13Q9H4Q3 707 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SLC25A22Q9H936 323 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 GTF3C1Q12789 2109 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 S1PR2O95136 353 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 HBZP02008 142 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PFN1P07737 140 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 IGHV1-2P23083 117 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PLA2G5P39877 138 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 DNLZQ5SXM8 178 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZNF808Q8N4W9 903 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR10G9Q8NGN4 311 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR10G7Q8NGN6 311 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms