RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 CTF1Q16619 201 aa9.48□□□□□ -0.89
TOP3A-215ENST00000583328 OR10K2Q6IF99 312 aa9.48□□□□□ -0.89
TOP3A-215ENST00000583328 HAPLN4Q86UW8 402 aa9.48□□□□□ -0.89
TOP3A-215ENST00000583328 CLVS1Q8IUQ0 354 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-215ENST00000583328 CROCCP3Q8IVE0 287 aa9.48□□□□□ -0.89
TOP3A-215ENST00000583328 C8orf31Q8N9H6 132 aa9.48□□□□□ -0.89
TOP3A-215ENST00000583328 BCL7BQ9BQE9 202 aa9.48□□□□□ -0.89
TOP3A-215ENST00000583328 NAA50Q9GZZ1 169 aaKnown RBP9.48□□□□□ -0.89
TOP3A-215ENST00000583328 TOLLIPQ9H0E2 274 aa9.48□□□□□ -0.89
TOP3A-215ENST00000583328 KCNK15Q9H427 330 aa9.48□□□□□ -0.89
TOP3A-215ENST00000583328 SPACA1Q9HBV2 294 aa9.48□□□□□ -0.89
TOP3A-215ENST00000583328 IGHV4OR15-8A0A075B7B6 117 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 A0A087WW49 117 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 C15orf65H3BRN8 121 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 HSPA12AO43301 675 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 RPS19P39019 145 aaKnown RBP9.47□□□□□ -0.89
TOP3A-215ENST00000583328 SERPINB10P48595 397 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 TMBIM6P55061 237 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 HAGHQ16775 308 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 C2orf76Q3KRA6 126 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 SLC25A48Q6ZT89 311 aaKnown RBP9.47□□□□□ -0.89
TOP3A-215ENST00000583328 SUMF2Q8NBJ7 301 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 RAB2BQ8WUD1 216 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 CCDC107Q8WV48 283 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 URM1Q9BTM9 101 aaKnown RBP9.47□□□□□ -0.89
TOP3A-215ENST00000583328 RSRP1Q9BUV0 290 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 DPCDQ9BVM2 203 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-215ENST00000583328 ELOVL1Q9BW60 279 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 TM2D1Q9BX74 207 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 RCC2Q9P258 522 aaKnown RBP9.47□□□□□ -0.89
TOP3A-215ENST00000583328 DAPK2Q9UIK4 370 aa9.47□□□□□ -0.89
TOP3A-215ENST00000583328 IGHV7-81A0A0B4J1V7 117 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 TMEM272A0A1B0GTI8 110 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 TMEM30CPA0ZSE6 113 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 SLC31A2O15432 143 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 NOL3O60936 208 aaKnown RBP9.46□□□□□ -0.9
TOP3A-215ENST00000583328 LGALS1P09382 135 aaKnown RBP9.46□□□□□ -0.9
TOP3A-215ENST00000583328 RAB6AP20340 208 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 SCAND1P57086 179 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 ATAD3CQ5T2N8 411 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 MINDY2Q8NBR6 621 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 PTX4Q96A99 478 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 FLYWCH2Q96CP2 140 aaKnown RBP9.46□□□□□ -0.9
TOP3A-215ENST00000583328 ZNF251Q9BRH9 671 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 LPAR5Q9H1C0 372 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 TUBA4BQ9H853 241 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 TPSG1Q9NRR2 321 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 RAB22AQ9UL26 194 aa9.46□□□□□ -0.9
TOP3A-215ENST00000583328 A0A0B4J203 849 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 A0A1W2PN81 502 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 ORC5O43913 435 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 PDCD6O75340 191 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 HLA-DRB1P01911 266 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 HSPB1P04792 205 aaKnown RBP9.45□□□□□ -0.9
TOP3A-215ENST00000583328 GLAP06280 429 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 FUT3P21217 361 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 BLVRBP30043 206 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-215ENST00000583328 CHRNA7P36544 502 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 ACTBP60709 375 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 ECSCRQ19T08 205 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 Q3ZCU0 254 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 IDNKQ5T6J7 187 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 SIGIRRQ6IA17 410 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 RAB12Q6IQ22 244 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 LIN54Q6MZP7 749 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 FAM89BQ8N5H3 189 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 LGALS14Q8TCE9 139 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 SLC25A46Q96AG3 418 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 NICN1Q9BSH3 213 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 DCSTAMPQ9H295 470 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 ZNF581Q9P0T4 197 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 ABRACLQ9P1F3 81 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 GNG12Q9UBI6 72 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 ETV7Q9Y603 341 aa9.45□□□□□ -0.9
TOP3A-215ENST00000583328 A0A0A6YYD4 124 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 MCRIP1C9JLW8 97 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 IGLV1-51P01701 117 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 IGHV3-11P01762 117 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 SNRPBP14678 240 aaKnown RBP9.44□□□□□ -0.9
TOP3A-215ENST00000583328 CNTFRP26992 372 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 ZNF134P52741 427 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 ZNF137PP52743 207 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 LSAMPQ13449 338 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 CT45A1Q5HYN5 189 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 OR56B1Q8NGI3 324 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 OR10V1Q8NGI7 309 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 CT45A3Q8NHU0 189 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 NEK7Q8TDX7 302 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 CASTOR1Q8WTX7 329 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 KCTD12Q96CX2 325 aaKnown RBP9.44□□□□□ -0.9
TOP3A-215ENST00000583328 RITA1Q96K30 269 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 NEDD4LQ96PU5 975 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 PEX16Q9Y5Y5 336 aa9.44□□□□□ -0.9
TOP3A-215ENST00000583328 RBMY1BA6NDE4 496 aaKnown RBP9.43□□□□□ -0.9
TOP3A-215ENST00000583328 METTL21EPA6NDL7 271 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 RBMY1EA6NEQ0 496 aaKnown RBP9.43□□□□□ -0.9
TOP3A-215ENST00000583328 FOXI3A8MTJ6 420 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-215ENST00000583328 C12orf77C9JDV5 145 aa9.43□□□□□ -0.9
TOP3A-215ENST00000583328 ARPC1BO15143 372 aaKnown RBP9.43□□□□□ -0.9
TOP3A-215ENST00000583328 NBR2O15453 112 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms