RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 USMG5Q96IX5 58 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 CYYR1Q96J86 154 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 TSNAXQ99598 290 aaKnown RBP9.59□□□□□ -0.87
SS18-219ENST00000581570 TINAGL1Q9GZM7 467 aaPredicted RBP9.59□□□□□ -0.87
SS18-219ENST00000581570 PARP12Q9H0J9 701 aaKnown RBP9.59□□□□□ -0.87
SS18-219ENST00000581570 BANF2Q9H503 90 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 ERVK13-1Q9NX77 482 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 PGPEP1Q9NXJ5 209 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 STEAP1Q9UHE8 339 aa9.59□□□□□ -0.87
SS18-219ENST00000581570 FAM90A7PA6NKC0 464 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 FAM90A23PA8MXZ1 464 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 GYG2O15488 501 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 SPDEFO95238 335 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 RPS16P62249 146 aaKnown RBP9.58□□□□□ -0.88
SS18-219ENST00000581570 RIPK1Q13546 671 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 DEFB114Q30KQ6 69 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 DNAL1Q4LDG9 190 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 DYNLRB2Q8TF09 96 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 SNAPC3Q92966 411 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 MUL1Q969V5 352 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 ABHD14BQ96IU4 210 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 TMEM68Q96MH6 324 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 SELENOIQ9C0D9 397 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 AASSQ9UDR5 926 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 KIAA1109Q2LD37 5005 aa9.58□□□□□ -0.88
SS18-219ENST00000581570 HECTD4Q9Y4D8 3996 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 A0A0B4J203 849 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 A0A0J9YWU9 116 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 BAG2O95816 211 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 CPEP16870 476 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 LGALS7P47929 136 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 EWSR1Q01844 656 aaKnown RBP eCLIP9.57□□□□□ -0.88
SS18-219ENST00000581570 HMGN3Q15651 99 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 SIGIRRQ6IA17 410 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 IL1F10Q8WWZ1 152 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 GGTLC1Q9BX51 225 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 ZFAND3Q9H8U3 227 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 ABRACLQ9P1F3 81 aa9.57□□□□□ -0.88
SS18-219ENST00000581570 PDCD6O75340 191 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 NDUFB8O95169 186 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 MGMTP16455 207 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 IGFBP3P17936 291 aaPredicted RBP9.56□□□□□ -0.88
SS18-219ENST00000581570 LGALS9CQ6DKI2 356 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 AWAT2Q6E213 333 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 RPL22L1Q6P5R6 122 aaKnown RBP9.56□□□□□ -0.88
SS18-219ENST00000581570 JAGN1Q8N5M9 183 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 OR14A2Q96R54 314 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 COA4Q9NYJ1 87 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 OAZ3Q9UMX2 235 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 AP4S1Q9Y587 144 aa9.56□□□□□ -0.88
SS18-219ENST00000581570 LOC102724200A0A096LPH7 203 aaPredicted RBP9.55□□□□□ -0.88
SS18-219ENST00000581570 H3BNX3 289 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 CRTAPO75718 401 aaPredicted RBP9.55□□□□□ -0.88
SS18-219ENST00000581570 IGKV1-16P04430 117 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 KIR2DS2P43631 304 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 SSBP2P81877 361 aaPredicted RBP9.55□□□□□ -0.88
SS18-219ENST00000581570 TNFRSF9Q07011 255 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 PJVKQ0ZLH3 352 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 CCDC58Q4VC31 144 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 XAF1Q6GPH4 301 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 SLC16A13Q7RTY0 426 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 LYG2Q86SG7 212 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 DRAXINQ8NBI3 349 aaPredicted RBP9.55□□□□□ -0.88
SS18-219ENST00000581570 CCDC197Q8NCU1 140 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 WDR89Q96FK6 387 aaPredicted RBP9.55□□□□□ -0.88
SS18-219ENST00000581570 Q96M66 194 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 AMBNQ9NP70 447 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 ZC4H2Q9NQZ6 224 aa9.55□□□□□ -0.88
SS18-219ENST00000581570 TRAV8-7A0A075B6U6 113 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 SAC3D1A6NKF1 404 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 BMPR1BO00238 502 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 ITGB1BP1O14713 200 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 RBMXL2O75526 392 aaKnown RBP9.54□□□□□ -0.88
SS18-219ENST00000581570 FCGR1AP12314 374 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 FOLR2P14207 255 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 LINC00205P59089 165 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 PDPNQ86YL7 162 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 WFDC3Q8IUB2 231 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 ZNF383Q8NA42 475 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 OR52I1Q8NGK6 324 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 OR13C5Q8NGS8 318 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 AGMATQ9BSE5 352 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 TECRQ9NZ01 308 aaKnown RBP9.54□□□□□ -0.88
SS18-219ENST00000581570 CKLFQ9UBR5 152 aa9.54□□□□□ -0.88
SS18-219ENST00000581570 C2orf70A6NJV1 201 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 PROP1O75360 226 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 APOA2P02652 100 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 APELAP0DMC3 54 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 EDN2P20800 178 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 CAPGP40121 348 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 ZIK1Q3SY52 487 aaPredicted RBP9.53□□□□□ -0.88
SS18-219ENST00000581570 CENPNQ96H22 339 aaPredicted RBP9.53□□□□□ -0.88
SS18-219ENST00000581570 NEDD4LQ96PU5 975 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 PHB2Q99623 299 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 SULT4A1Q9BR01 284 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 C11orf54Q9H0W9 315 aaPredicted RBP9.53□□□□□ -0.88
SS18-219ENST00000581570 ORC6Q9Y5N6 252 aa9.53□□□□□ -0.88
SS18-219ENST00000581570 TRBV5-5A0A0J9YX44 114 aa9.52□□□□□ -0.89
SS18-219ENST00000581570 SPRY2O43597 315 aa9.52□□□□□ -0.89
SS18-219ENST00000581570 IGLV2-23P01705 113 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms