RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 ABCA1O95477 2261 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 SAA2-SAA4A0A096LPE2 208 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 A0A0A6YYJ9 748 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 SMAD7O15105 426 aaKnown RBP11.28□□□□□ -0.6
TSEN54-206ENST00000579449 ARG1P05089 322 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 SAA2P0DJI9 122 aaPredicted RBP11.28□□□□□ -0.6
TSEN54-206ENST00000579449 SUPT4H1P63272 117 aaKnown RBP11.28□□□□□ -0.6
TSEN54-206ENST00000579449 DHRS2Q13268 280 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 EIF4EBP1Q13541 118 aaPredicted RBP11.28□□□□□ -0.6
TSEN54-206ENST00000579449 NCR3LG1Q68D85 454 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 ZNF626Q68DY1 528 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 CYB5R2Q6BCY4 276 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 LYG2Q86SG7 212 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 SGPP2Q8IWX5 399 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 PDZD9Q8IXQ8 264 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 LHX4Q969G2 390 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 ZNF251Q9BRH9 671 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 GHITMQ9H3K2 345 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 C7orf69Q9H7B7 122 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 NAA60Q9H7X0 242 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 GPN1Q9HCN4 374 aaPredicted RBP11.28□□□□□ -0.6
TSEN54-206ENST00000579449 AUP1Q9Y679 476 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 ITPR3Q14573 2671 aa11.28□□□□□ -0.6
TSEN54-206ENST00000579449 A0A1W2PRD5 423 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 A0A1W2PRF3 423 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 A0A1W2PRM7 423 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 C7orf66A4D0T2 115 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 ODF3BA8MYP8 253 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 M0R1X1 148 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 SFT2D2O95562 160 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 HLA-AP01891 365 aaKnown RBP11.27□□□□□ -0.61
TSEN54-206ENST00000579449 ZNF16P17020 682 aaPredicted RBP11.27□□□□□ -0.61
TSEN54-206ENST00000579449 VAMP1P23763 118 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 IL3RAP26951 378 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 ZNF137PP52743 207 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 CBX3Q13185 183 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 SLC9A3R2Q15599 337 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 ZNF66Q6ZN08 573 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 OR4P4Q8NGL7 312 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 OR51H1Q8NH63 302 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 ZNF431Q8TF32 576 aaPredicted RBP11.27□□□□□ -0.61
TSEN54-206ENST00000579449 CASTOR1Q8WTX7 329 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 S1PR3Q99500 378 aa11.27□□□□□ -0.61
TSEN54-206ENST00000579449 AMMECR1Q9Y4X0 333 aaPredicted RBP11.27□□□□□ -0.61
TSEN54-206ENST00000579449 CSMD1Q96PZ7 3565 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 CREBBPQ92793 2442 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 C3orf85A0A1B0GTC6 90 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 SNRPGP15A8MWD9 76 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 BUB1B-PAK6H3BSN5 160 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 IFNA2P01563 188 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 OR5AC1P0C628 307 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 F2RP25116 425 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 DUTP33316 252 aaKnown RBP11.26□□□□□ -0.61
TSEN54-206ENST00000579449 UBE2E1P51965 193 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 LINC00205P59089 165 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 RPL30P62888 115 aaKnown RBP11.26□□□□□ -0.61
TSEN54-206ENST00000579449 SP6Q3SY56 376 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 C11orf88Q6PI97 169 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 ZNF833PQ6ZTB9 187 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 KCTD9Q7L273 389 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 DRAXINQ8NBI3 349 aaPredicted RBP11.26□□□□□ -0.61
TSEN54-206ENST00000579449 ST6GALNAC6Q969X2 333 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 GALNT14Q96FL9 552 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 TP53RKQ96S44 253 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 HSD17B10Q99714 261 aaKnown RBP11.26□□□□□ -0.61
TSEN54-206ENST00000579449 OR51J1Q9H342 316 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 KCNIP3Q9Y2W7 256 aa11.26□□□□□ -0.61
TSEN54-206ENST00000579449 MYO9AB2RTY4 2548 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 CENPVL3A0A0U1RRI6 287 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 LINC00473A8K010 186 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 RNF212BA8MTL3 300 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 J3QLI3 93 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 CREBL2O60519 120 aaPredicted RBP11.25□□□□□ -0.61
TSEN54-206ENST00000579449 AVPP01185 164 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 CATR1Q13166 79 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 DIAPH2-AS1Q14236 149 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 TMEM187Q14656 261 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 FAM71F2Q6NXP2 309 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 TCTEX1D2Q8WW35 142 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 PRR13Q9NZ81 148 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 NOTCH2Q04721 2471 aa11.25□□□□□ -0.61
TSEN54-206ENST00000579449 H0Y980 276 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 LY6LH3BQJ8 138 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 DUS4LO95620 317 aaKnown RBP11.24□□□□□ -0.61
TSEN54-206ENST00000579449 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 ANXA3P12429 323 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 HTR1DP28221 377 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 REG1BP48304 166 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 THBS3P49746 956 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 LGALS4P56470 323 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 ANKRD55Q3KP44 614 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 LIN54Q6MZP7 749 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 LHFPL4Q7Z7J7 247 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 CADM3Q8N126 398 aa11.24□□□□□ -0.61
TSEN54-206ENST00000579449 C12orf45Q8N5I9 185 aaPredicted RBP11.24□□□□□ -0.61
TSEN54-206ENST00000579449 GLYATL2Q8WU03 294 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms