RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 OR10G4Q8NGN3 311 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RFESDQ8TAC1 157 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 FAM57AQ8TBR7 257 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PINX1Q96BK5 328 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 MUCL1Q96DR8 90 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CIB3Q96Q77 187 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 DCTN5Q9BTE1 182 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RSG1Q9BU20 258 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 C20orf24Q9BUV8 137 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TMEM147Q9BVK8 224 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 MRPL37Q9BZE1 423 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 NCOR1P1Q9H4R4 102 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 DUSP13Q9UII6 198 aa7.79□□□□□ -1.16
CDK5RAP3-208ENST00000578525 IGLV3-9A0A075B6K5 115 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 IGHV3OR15-7A0A075B7D8 119 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 UBE2L5PA0A1B0GUS4 154 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 A0A1W2PPH5 198 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 C1orf196B1AJZ1 125 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 F2RL2O00254 374 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TM4SF5O14894 197 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 YPEL1O60688 119 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 KRASP01116 189 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 GZMHP20718 246 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PTAFRP25105 342 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 GPR12P47775 334 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 BRWD1-AS2P59051 145 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 KRTCAP3Q53RY4 240 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ALKBH2Q6NS38 261 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 MOGAT3Q86VF5 341 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RPRMLQ8N4K4 120 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 DTD1Q8TEA8 209 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 ITLN1Q8WWA0 313 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 TAF15Q92804 592 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 R3HDM4Q96D70 268 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 YPEL2Q96QA6 119 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 OR2V2Q96R30 315 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RAB9BQ9NP90 201 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 RPRMQ9NS64 109 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CISD1Q9NZ45 108 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 CLN8Q9UBY8 286 aa7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 PUS1Q9Y606 427 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDK5RAP3-208ENST00000578525 A0A0C4DFX4 3053 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 A0A1W2PPE2 198 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FAM90A9PA6NNJ1 464 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 LINC00473A8K010 186 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 PMS2P5A8MQ11 134 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CEBPZOSA8MTT3 80 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 DEFB108AA8MXU0 73 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 H3BQ15 152 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ITGB1BP1O14713 200 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 KLK10O43240 276 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SPRY3O43610 288 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZG16O60844 167 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 LY86O95711 162 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 LHBP01229 141 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IFNA1P01562 189 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IFNA4P05014 189 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 BCL2P10415 239 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 DAOP14920 347 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 DUTP33316 252 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MAS1LP35410 378 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 KIR2DS2P43631 304 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 GATA4P43694 442 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 HOXA1P49639 335 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 HABP2Q14520 560 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF726P1Q15940 193 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 LTC4SQ16873 150 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MORN2Q502X0 79 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SPRNQ5BIV9 151 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR8G2PQ6IF36 304 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 VHLLQ6RSH7 139 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FAM180AQ6UWF9 173 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CENPVQ7Z7K6 275 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF429Q86V71 674 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FAM222BQ8WU58 562 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RAB39BQ96DA2 213 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 TVP23CQ96ET8 276 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RCC1LQ96I51 464 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 AGMATQ9BSE5 352 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 VSIRQ9H7M9 311 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CALYQ9NYX4 217 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR6C3Q9NZP0 311 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 GNG13Q9P2W3 67 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 GNG12Q9UBI6 72 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 USP34Q70CQ2 3546 aa7.77□□□□□ -1.17
CDK5RAP3-208ENST00000578525 A0A087WWC5 75 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MAP1LC3B2A6NCE7 125 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 K7EM74 188 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 M0R1X1 148 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RBFOX2O43251 390 aaKnown RBP eCLIP7.76□□□□□ -1.173e-11■□□□□ 9.1
CDK5RAP3-208ENST00000578525 HPRT1P00492 218 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RAB5AP20339 215 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 NBL1P41271 181 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ELLP55199 621 aaPredicted RBP7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SELENOVP59797 346 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 PMS2P11Q13670 270 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 VWC2Q2TAL6 325 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 AARDQ4LEZ3 155 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 NCR3LG1Q68D85 454 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 LCN15Q6UWW0 184 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms