RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 UNQ9370/PRO34162Q6UXP9 181 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF705AQ6ZN79 300 aaPredicted RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF836Q6ZNA1 936 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 TEX43Q6ZNM6 134 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC25A26Q70HW3 274 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC35D2Q76EJ3 337 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ERASQ7Z444 233 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 LYG2Q86SG7 212 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 C17orf82Q86X59 251 aaPredicted RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 KRTAP11-1Q8IUC1 163 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 TGIF2LYQ8IUE0 185 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 NRMQ8IXM6 262 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF100Q8IYN0 542 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF101Q8IZC7 436 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 C17orf78Q8N4C9 275 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 COMMD1Q8N668 190 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ACBD7Q8N6N7 88 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC35G3Q8N808 338 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SUMF2Q8NBJ7 301 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 MFSD9Q8NBP5 474 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 APCDD1LQ8NCL9 501 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR5T1Q8NG75 326 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR2T33Q8NG76 320 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR2AP1Q8NGE2 309 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR8S1Q8NH09 359 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR4X1Q8NH49 305 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR4C6Q8NH72 309 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR5AK2Q8NH90 309 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR2V1Q8NHB1 315 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 LYPD6BQ8NI32 183 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CASTOR1Q8WTX7 329 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ORAOV1Q8WV07 137 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 THRSPQ92748 146 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 KLK6Q92876 244 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CDS1Q92903 461 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 NEIL2Q969S2 332 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 MRGPRFQ96AM1 343 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SEC22AQ96IW7 307 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC35E1Q96K37 410 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 AQP10Q96PS8 301 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 OR8B4Q96RC9 309 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 RNF2Q99496 336 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ARHGDIGQ99819 225 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PDCD1LG2Q9BQ51 273 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 C20orf144Q9BQM9 153 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 VPS25Q9BRG1 176 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 GINS3Q9BRX5 216 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 NICN1Q9BSH3 213 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 MED10Q9BTT4 135 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SMIM3Q9BZL3 60 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 NMES1Q9C002 83 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PARP12Q9H0J9 701 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PCBD2Q9H0N5 130 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 CST11Q9H112 138 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SYT4Q9H2B2 425 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ARV1Q9H2C2 271 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 TCEAL2Q9H3H9 227 aaPredicted RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 KCNJ16Q9NPI9 418 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 INPP5EQ9NRR6 644 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC2A8Q9NY64 477 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 ONECUT1Q9UBC0 465 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 NAGKQ9UJ70 344 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 PITPNC1Q9UKF7 332 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 B9D1Q9UPM9 204 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 SCML2Q9UQR0 700 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 FARSAQ9Y285 508 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 RCL1Q9Y2P8 373 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 WDR45Q9Y484 360 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 RBM7Q9Y580 266 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 MRPS18BQ9Y676 258 aaKnown RBP1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 URGCP-MRPS24S4R325 110 aa1.53□□□□□ -2.16
PTP4A1-204ENST00000578299 MYO10Q9HD67 2058 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 DOCK4Q8N1I0 1966 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 NUP210Q8TEM1 1887 aaPredicted RBP1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 IGHV1OR15-1A0A075B7D0 117 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 A0A087WUU8 490 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 A0A087WWC5 75 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 TRAV39A0A0B4J263 110 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 A0A1B0GW64 132 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 TSPAN11A1L157 253 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 XKRY2A2RUG3 117 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 FAM231BA6NCW3 169 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 TLCD2A6NGC4 264 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 A6NIZ1 184 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 VSTM2BA6NLU5 285 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 CPSF4LA6NMK7 179 aaKnown RBP1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 FTCDNL1E5RQL4 147 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 H0YIV9 168 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 H3BQ15 152 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 HMGN4O00479 90 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 PIRO00625 290 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 XKRYO14609 159 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 CDC42EP2O14613 210 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 HSD17B6O14756 317 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 FCMRO60667 390 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 YPEL1O60688 119 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 STK16O75716 305 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 MMP23AO75900 390 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 ARL6IP5O75915 188 aa1.52□□□□□ -2.17
PTP4A1-204ENST00000578299 SCGNO76038 276 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms