RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 LSAMPQ13449 338 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 ZNF260Q3ZCT1 412 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 Q6ZS49 121 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 Q8N6K4 173 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 ABHD14BQ96IU4 210 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 NABP2Q9BQ15 211 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 AGMATQ9BSE5 352 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 ST6GALNAC5Q9BVH7 336 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 DCSTAMPQ9H295 470 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 RDH8Q9NYR8 311 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 ZNF221Q9UK13 617 aa12.66□□□□□ -0.38
VAPA-204ENST00000577901 TRAV18A0A075B6X5 111 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 TRBV6-7A0A0A0MS04 114 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
VAPA-204ENST00000577901 IGSF11Q5DX21 431 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 KHDC1LQ5JSQ8 128 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 C10orf99Q6UWK7 81 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 MAFIPQ8WZ33 124 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 SLC25A46Q96AG3 418 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 S100A16Q96FQ6 103 aaKnown RBP12.65□□□□□ -0.38
VAPA-204ENST00000577901 RASL11BQ9BPW5 248 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 GINS4Q9BRT9 223 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 CABLES2Q9BTV7 478 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 MRPL20Q9BYC9 149 aaKnown RBP12.65□□□□□ -0.38
VAPA-204ENST00000577901 TOLLIPQ9H0E2 274 aa12.65□□□□□ -0.38
VAPA-204ENST00000577901 PARP12Q9H0J9 701 aaKnown RBP12.65□□□□□ -0.38
VAPA-204ENST00000577901 ELF5Q9UKW6 265 aaPredicted RBP12.65□□□□□ -0.38
VAPA-204ENST00000577901 TMEM235A6NFC5 223 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 CTXN2P0C2S0 81 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 HOXD3P31249 432 aaPredicted RBP12.64□□□□□ -0.39
VAPA-204ENST00000577901 MC5RP33032 325 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 GPR12P47775 334 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 VBP1P61758 197 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 NCS1P62166 190 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 EGFEM1PQ0D2K5 195 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 RPL39P5Q59GN2 51 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 ANKRD13BQ86YJ7 626 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 SLC25A38Q96DW6 304 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 ZNF251Q9BRH9 671 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 LIN7CQ9NUP9 197 aaKnown RBP12.64□□□□□ -0.39
VAPA-204ENST00000577901 RNF150Q9ULK6 438 aa12.64□□□□□ -0.39
VAPA-204ENST00000577901 CD69Q07108 199 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 UBE2NLQ5JXB2 153 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 GPR141Q7Z602 305 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 FOXRED2Q8IWF2 684 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 LINC00482Q8N8I6 264 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 Q8N9W7 124 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 NUDCD2Q8WVJ2 157 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 ABCG5Q9H222 651 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 PLSCR3Q9NRY6 295 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 RBM7Q9Y580 266 aaKnown RBP12.63□□□□□ -0.39
VAPA-204ENST00000577901 TENM3Q9P273 2699 aa12.63□□□□□ -0.39
VAPA-204ENST00000577901 OR5H14A6NHG9 310 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 OR8U9P0C7N5 309 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 CT45A6P0DMU7 189 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 CT45A5P0DMU8 189 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 CT45A7P0DMV0 189 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 RORCP51449 518 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 F2RL1P55085 397 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 ACTBP60709 375 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 GPR107Q5VW38 600 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 SLC35E3Q7Z769 313 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 SAMD12Q8N8I0 201 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.62□□□□□ -0.39
VAPA-204ENST00000577901 OR8U1Q8NH10 309 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 DPF1Q92782 380 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 GPR61Q9BZJ8 451 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 GAB2Q9UQC2 676 aa12.62□□□□□ -0.39
VAPA-204ENST00000577901 IGKV1D-8A0A087WSZ0 117 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 H7C2Y5 167 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 XRCC3O43542 346 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 SSX5O60225 188 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 IGHG2P01859 326 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 MMDQ15546 238 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 CNIH2Q6PI25 160 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 MRPL41Q8IXM3 137 aaKnown RBP12.61□□□□□ -0.39
VAPA-204ENST00000577901 CHPT1Q8WUD6 406 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 ACOT12Q8WYK0 555 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 WWC2-AS2Q96NR7 200 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 B9D2Q9BPU9 175 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 AUNIPQ9H7T9 357 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 ANXA10Q9UJ72 324 aa12.61□□□□□ -0.39
VAPA-204ENST00000577901 PSMB11A5LHX3 300 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 GABARAPO95166 117 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 TFAP2AP05549 437 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 SOX6P35712 828 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 ALDH3B2P48448 385 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 SLC35B1P78383 322 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 CTF1Q16619 201 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 TMEM69Q5SWH9 247 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 FAM131AQ6UXB0 335 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 ETV3LQ6ZN32 361 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 H1FOOQ8IZA3 346 aaPredicted RBP12.6□□□□□ -0.39
VAPA-204ENST00000577901 FAM71E2Q8N5Q1 922 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 OR5AN1Q8NGI8 311 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 CMTM3Q96MX0 182 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 GON7Q9BXV9 100 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 NAA50Q9GZZ1 169 aaKnown RBP12.6□□□□□ -0.39
VAPA-204ENST00000577901 OR2D2Q9H210 308 aa12.6□□□□□ -0.39
VAPA-204ENST00000577901 KIAA1456Q9P272 454 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms