RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 PARP12Q9H0J9 701 aaKnown RBP10.77□□□□□ -0.69
CIITA-210ENST00000575513 MMP27Q9H306 513 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 NDUFA13Q9P0J0 144 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 RSL24D1Q9UHA3 163 aaKnown RBP10.77□□□□□ -0.69
CIITA-210ENST00000575513 ZNF221Q9UK13 617 aa10.77□□□□□ -0.69
CIITA-210ENST00000575513 BET1O15155 118 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 HPGDSO60760 199 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 ELK1P19419 428 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 CBX5P45973 191 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 TAS2R20P59543 309 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 CD83Q01151 205 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 TMEM95Q3KNT9 176 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 C9orf152Q5JTZ5 239 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 TMEM69Q5SWH9 247 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 NDUFA11Q86Y39 141 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 FAM71E2Q8N5Q1 922 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 NPBQ8NG41 125 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 OR5AN1Q8NGI8 311 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 CHPT1Q8WUD6 406 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 ABHD14BQ96IU4 210 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 RASL11BQ9BPW5 248 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 ST6GALNAC5Q9BVH7 336 aa10.76□□□□□ -0.69
CIITA-210ENST00000575513 CCDC160A6NGH7 325 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 KCNAB3O43448 404 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 PROP1O75360 226 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 RBBP9O75884 186 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 CSF1P09603 554 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 CD28P10747 220 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 GPR12P47775 334 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 F2RL1P55085 397 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 TAGLNQ01995 201 aaKnown RBP10.75□□□□□ -0.69
CIITA-210ENST00000575513 RPL39P5Q59GN2 51 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 CNIH2Q6PI25 160 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 SLC35E3Q7Z769 313 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 FOXRED2Q8IWF2 684 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 H1FOOQ8IZA3 346 aaPredicted RBP10.75□□□□□ -0.69
CIITA-210ENST00000575513 GINS4Q9BRT9 223 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 GON7Q9BXV9 100 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 SLIRPQ9GZT3 109 aaKnown RBP10.75□□□□□ -0.69
CIITA-210ENST00000575513 ZNF580Q9UK33 172 aa10.75□□□□□ -0.69
CIITA-210ENST00000575513 VWFP04275 2813 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 IGKV1D-8A0A087WSZ0 117 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 SH2D7A6NKC9 451 aaPredicted RBP10.74□□□□□ -0.69
CIITA-210ENST00000575513 H0YJW9 148 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 AP4M1O00189 453 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 HLA-DQB1P01920 261 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 OPN1MWP04001 364 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 OPN1MW2P0DN77 364 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 OPN1MW3P0DN78 364 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 ACTBP60709 375 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 HOGA1Q86XE5 327 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 COMMD1Q8N668 190 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 OR4X2Q8NGF9 303 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 MAFIPQ8WZ33 124 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 DGCR14Q96DF8 476 aaKnown RBP10.74□□□□□ -0.69
CIITA-210ENST00000575513 NXF2Q9GZY0 626 aaKnown RBP10.74□□□□□ -0.69
CIITA-210ENST00000575513 MIXL1Q9H2W2 232 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 ANXA10Q9UJ72 324 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 ADAM30Q9UKF2 790 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 RNF150Q9ULK6 438 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 ANAPC10Q9UM13 185 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 WASHC3Q9Y3C0 194 aa10.74□□□□□ -0.69
CIITA-210ENST00000575513 WNK1Q9H4A3 2382 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 PSMB11A5LHX3 300 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 FAM25AB3EWG3 89 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 FAM25CB3EWG5 89 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 FAM25GB3EWG6 89 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 CTDSP2O14595 271 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 NBR2O15453 112 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 SLC22A5O76082 557 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 NDUFA3O95167 84 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 OR8U9P0C7N5 309 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 MMDQ15546 238 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 C11orf44Q8N8P7 122 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 OR8U1Q8NH10 309 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 C15orf40Q8WUR7 153 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 RITA1Q96K30 269 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 CITED2Q99967 270 aaPredicted RBP10.73□□□□□ -0.69
CIITA-210ENST00000575513 SCPEP1Q9HB40 452 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 A3GALT2U3KPV4 340 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 CMYA5Q8N3K9 4069 aa10.73□□□□□ -0.69
CIITA-210ENST00000575513 DPPA5A6NC42 116 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 SULT1C2O00338 296 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 HLA-DRB1P01911 266 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 IGF1P05019 195 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 PTHLHP12272 177 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 PRSS3P35030 304 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 SLC35B1P78383 322 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 C5orf64Q2M2E5 130 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 TCTEX1D4Q5JR98 221 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 FAM131AQ6UXB0 335 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 STPG2Q8N412 459 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 BEST4Q8NFU0 473 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 GPX8Q8TED1 209 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 OR2D2Q9H210 308 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 SDHAF2Q9NX18 166 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 KIAA1456Q9P272 454 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 RABL2AQ9UBK7 228 aaPredicted RBP10.72□□□□□ -0.69
CIITA-210ENST00000575513 EXTL2Q9UBQ6 330 aa10.72□□□□□ -0.69
CIITA-210ENST00000575513 RABL2BQ9UNT1 228 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms