RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 CHST1O43916 411 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 TUSC2O75896 110 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 CD24P25063 80 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 RCVRNP35243 200 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 RELBQ01201 579 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 MSMO1Q15800 293 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 ACTBL2Q562R1 376 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 AWAT1Q58HT5 328 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 Q6ZSV7 163 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 OVCH2Q7RTZ1 564 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 TMEM219Q86XT9 240 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 LAX1Q8IWV1 398 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 Q8N2B8 174 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 ZBTB34Q8NCN2 500 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 OR5AN1Q8NGI8 311 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 OR5H2Q8NGV7 314 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 LINC01006Q8NI28 216 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 GIMAP1Q8WWP7 306 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 RNF5Q99942 180 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 DCUN1D5Q9BTE7 237 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 PARP12Q9H0J9 701 aaKnown RBP7.65□□□□□ -1.18
CCDC40-214ENST00000575431 OR2D2Q9H210 308 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 ZNF107Q9UII5 783 aaPredicted RBP7.65□□□□□ -1.18
CCDC40-214ENST00000575431 RNF150Q9ULK6 438 aa7.65□□□□□ -1.18
CCDC40-214ENST00000575431 NF1P21359 2839 aa7.65□□□□□ -1.19
CCDC40-214ENST00000575431 IGHV3-72A0A0B4J1Y9 119 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 DPPA5A6NC42 116 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 MEIS3P1A6NDR6 274 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 FABP12A6NFH5 140 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 APOA2P02652 100 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 CT45A6P0DMU7 189 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 CT45A5P0DMU8 189 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 CT45A7P0DMV0 189 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 RRASP10301 218 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 TBPP20226 339 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 NFYAP23511 347 aaPredicted RBP7.64□□□□□ -1.19
CCDC40-214ENST00000575431 PTBP1P26599 531 aaKnown RBP eCLIP7.64□□□□□ -1.19
CCDC40-214ENST00000575431 FCGR2CP31995 323 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 TNFSF8P32971 234 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 THBS3P49746 956 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 DYRK1AQ13627 763 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 IL18Q14116 193 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 RPL39P5Q59GN2 51 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 DHRS11Q6UWP2 260 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 PDPNQ86YL7 162 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 Q8N6K4 173 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF645Q8N7E2 425 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 C3orf56Q8N813 242 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 OR6F1Q8NGZ6 308 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 SNAPC3Q92966 411 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 ABHD1Q96SE0 405 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 MRPL20Q9BYC9 149 aaKnown RBP7.64□□□□□ -1.19
CCDC40-214ENST00000575431 LIN7CQ9NUP9 197 aaKnown RBP7.64□□□□□ -1.19
CCDC40-214ENST00000575431 SDHAF2Q9NX18 166 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 TAS2R8Q9NYW2 309 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 EHFQ9NZC4 300 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 MTFP1Q9UDX5 166 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 WASHC3Q9Y3C0 194 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 RNF114Q9Y508 228 aa7.64□□□□□ -1.19
CCDC40-214ENST00000575431 NCBP2LA6PVI3 153 aaKnown RBP7.63□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF736B4DX44 427 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-214ENST00000575431 H0YJW9 148 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 H7C2Y5 167 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 M0R1X1 148 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 PROP1O75360 226 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 PPYP01298 95 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 MDKP21741 143 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-214ENST00000575431 CBX3Q13185 183 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 HNF4GQ14541 408 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 ARSJQ5FYB0 599 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-214ENST00000575431 VAX1Q5SQQ9 334 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 LPCAT3Q6P1A2 487 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 TMEM17Q86X19 198 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 LYSMD2Q8IV50 215 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 HSD17B10Q99714 261 aaKnown RBP7.63□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF747Q9BV97 191 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 BATF3Q9NR55 127 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 MXRA5Q9NR99 2828 aa7.63□□□□□ -1.19
CCDC40-214ENST00000575431 PEX14O75381 377 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 IFNA6P05013 189 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 CSF1P09603 554 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 AADACP22760 399 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 HLA-DMAP28067 261 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 LGALS7P47929 136 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 RFX2P48378 723 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 PROK1P58294 105 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 TAS2R19P59542 299 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 HERV-K104P61576 105 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 TSPAN5P62079 268 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 BLCAPP62952 87 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 RTL8BQ17RB0 113 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 ABCA11PQ4W5N1 156 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 RNASE10Q5GAN6 216 aaKnown RBP7.62□□□□□ -1.19
CCDC40-214ENST00000575431 SHISA2Q6UWI4 295 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 FAM131AQ6UXB0 335 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 ZNF66Q6ZN08 573 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 ARRDC1Q8N5I2 433 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 C5orf56Q8N8D9 126 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 TMEM229BQ8NBD8 167 aa7.62□□□□□ -1.19
CCDC40-214ENST00000575431 OR52I2Q8NH67 350 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms