RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 PROP1O75360 226 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 IGHV3-11P01762 117 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 IGF1P05019 195 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 ELANEP08246 267 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 EGR2P11161 476 aaPredicted RBP7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 FUT3P21217 361 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 CAPGP40121 348 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 WNT4P56705 351 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 P2RY14Q15391 338 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 HMGN3Q15651 99 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 C5orf64Q2M2E5 130 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 C6orf183Q5T699 404 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 ZNF833PQ6ZTB9 187 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 STX19Q8N4C7 294 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 COMMD1Q8N668 190 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 DRAXINQ8NBI3 349 aaPredicted RBP7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 OR5M8Q8NGP6 311 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 IL1F10Q8WWZ1 152 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 DCUN1D4Q92564 292 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 DLX4Q92988 240 aaPredicted RBP7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 C5orf30Q96GV9 206 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 CLCC1Q96S66 551 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 TMED9Q9BVK6 235 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 OR51J1Q9H342 316 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 FKBP14Q9NWM8 211 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 CKLFQ9UBR5 152 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 PSORS1C1Q9UIG5 152 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 LSM2Q9Y333 95 aaKnown RBP7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 U3KQK5 164 aa7.12□□□□□ -1.27
NPLOC4-210ENST00000572824 TRAV41A0A0B4J266 112 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 IGKV1-6A0A0C4DH72 117 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 TRIM64CA6NLI5 447 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 DIRC3C9JPN6 131 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 MYL12BO14950 172 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 SOCS1O15524 211 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 ZNF780AO75290 641 aaPredicted RBP7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 HLA-DRB1P01911 266 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 CD3GP09693 182 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 CT45A6P0DMU7 189 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 CT45A5P0DMU8 189 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 CT45A7P0DMV0 189 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 GCSHP23434 173 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 CLDN12P56749 244 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 RPS25P62851 125 aaKnown RBP7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 SSBP2P81877 361 aaPredicted RBP7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 QRFPP83859 136 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 GABPB1Q06547 395 aaPredicted RBP7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 RBM48Q5RL73 367 aaKnown RBP7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 C9orf66Q5T8R8 295 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 SBSPONQ8IVN8 264 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 DHRSXQ8N5I4 330 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 NANOGP1Q8N7R0 232 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 OR1N2Q8NGR9 330 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 SETD6Q8TBK2 473 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 ARPC1AQ92747 370 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 MCRIP2Q9BUT9 160 aaKnown RBP7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 NKX1-2Q9UD57 310 aaPredicted RBP7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 AK3Q9UIJ7 227 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 RNF150Q9ULK6 438 aa7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 ZNF256Q9Y2P7 627 aaPredicted RBP7.11□□□□□ -1.27
NPLOC4-210ENST00000572824 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 A0A1W2PN81 502 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 EFCAB10A6NFE3 127 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 KRTAP9-7A8MTY7 169 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 H0YJW9 148 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 SCAF4O95104 1147 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 NDUFA3O95167 84 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 NAPSAO96009 420 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 SPNP16150 400 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 CHRNA7P36544 502 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 RAB9AP51151 201 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 RPS27AP62979 156 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 Q3ZCU0 254 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 ACSM3Q53FZ2 586 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 OGFRL1Q5TC84 451 aaPredicted RBP7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 UNQ9370/PRO34162Q6UXP9 181 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 MINDY2Q8NBR6 621 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 TMEM203Q969S6 136 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 MRPS24Q96EL2 167 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 MS4A10Q96PG2 267 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 KRTAP9-9Q9BYP9 154 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 KRTAP9-4Q9BYQ2 154 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 SPACA1Q9HBV2 294 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 JPT1Q9UK76 154 aa7.1□□□□□ -1.27
NPLOC4-210ENST00000572824 ALMS1Q8TCU4 4167 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 PLECQ15149 4684 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 FAM90A10PA6NDY2 464 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 FAM90A7PA6NKC0 464 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 FOXI3A8MTJ6 420 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 TMEM14DPA8MWL7 114 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 FAM90A23PA8MXZ1 464 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 ARPC1BO15143 372 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 TXNL1O43396 289 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 YPEL1O60688 119 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 SAP30O75446 220 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 RBMXL2O75526 392 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 IGKV1-16P04430 117 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 SCTP09683 121 aa7.09□□□□□ -1.27
NPLOC4-210ENST00000572824 SLC6A1P30531 599 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms