RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 SVOPQ8N4V2 548 aa7.54□□□□□ -1.2
TRAPPC1-205ENST00000572656 POC5Q8NA72 575 aa7.54□□□□□ -1.2
TRAPPC1-205ENST00000572656 ABHD14BQ96IU4 210 aa7.54□□□□□ -1.2
TRAPPC1-205ENST00000572656 TSNAXQ99598 290 aaKnown RBP7.54□□□□□ -1.2
TRAPPC1-205ENST00000572656 AGMATQ9BSE5 352 aa7.54□□□□□ -1.2
TRAPPC1-205ENST00000572656 PARP12Q9H0J9 701 aaKnown RBP7.54□□□□□ -1.2
TRAPPC1-205ENST00000572656 ZNF355PQ9NSJ1 428 aa7.54□□□□□ -1.2
TRAPPC1-205ENST00000572656 A0A0G2JLM5 398 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 PNMA8CA0A1B0GUJ8 204 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 H3BUA1 57 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 JTBO76095 146 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 SPDEFO95238 335 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 NAPSAO96009 420 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 CD1AP06126 327 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 SNRPBP14678 240 aaKnown RBP7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 CPEP16870 476 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 RPS27AP62979 156 aaKnown RBP7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 FXYD3Q14802 87 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 IL34Q6ZMJ4 242 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 MOB1BQ7L9L4 216 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 OR9G4Q8NGQ1 327 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 THRSPQ92748 146 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 THAP7Q9BT49 309 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 C11orf54Q9H0W9 315 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 TUBA4BQ9H853 241 aa7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 CHMP1AQ9HD42 196 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 SMPD3Q9NY59 655 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC1-205ENST00000572656 ANKRD34BA5PLL1 514 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 DYNC1I1O14576 645 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 PROP1O75360 226 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 BRI3O95415 125 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 IGKV1-16P04430 117 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 CELP19835 753 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 ZBTB25P24278 435 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 MAPK3P27361 379 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 HTR2CP28335 458 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 CEACAM6P40199 344 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 SYNJ2BPP57105 145 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 RPS16P62249 146 aaKnown RBP7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 ST3GAL4Q11206 333 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 OR10K2Q6IF99 312 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 GTSCR1Q86UQ5 136 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 PQLC1Q8N2U9 271 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 DRAXINQ8NBI3 349 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 OR5T1Q8NG75 326 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 GRPEL2Q8TAA5 225 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 IL17DQ8TAD2 202 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 KCNG3Q8TAE7 436 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 SETD6Q8TBK2 473 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 EDARADDQ8WWZ3 215 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 GGHQ92820 318 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 PTX4Q96A99 478 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 TMED9Q9BVK6 235 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 TMEM59Q9BXS4 323 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 RIMS4Q9H426 269 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 S100A14Q9HCY8 104 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 SIGLEC8Q9NYZ4 499 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 STARD9Q9P2P6 4700 aa7.52□□□□□ -1.21
TRAPPC1-205ENST00000572656 SORL1Q92673 2214 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 TRBV6-6A0A0A6YYG2 114 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 EFCAB10A6NFE3 127 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 SLC25A17O43808 307 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 CNIH1O95406 144 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 CSN3P07498 182 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 AADACP22760 399 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 TATDN3Q17R31 274 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 C1orf100Q5SVJ3 147 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 GLT8D1Q68CQ7 371 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 LCN12Q6JVE5 192 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 PDPNQ86YL7 162 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 Q8N402 240 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 ZNF383Q8NA42 475 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 TMEM68Q96MH6 324 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 NICN1Q9BSH3 213 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 TM2D1Q9BX74 207 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 PLEKHJ1Q9NW61 149 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 OR1A1Q9P1Q5 309 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 PEF1Q9UBV8 284 aaKnown RBP7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 MGAT4AQ9UM21 535 aa7.51□□□□□ -1.21
TRAPPC1-205ENST00000572656 APOA2P02652 100 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 WNT4P56705 351 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 LINC00205P59089 165 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 HLA-DRB3P79483 266 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 SSBP2P81877 361 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 QRFPP83859 136 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 UNC119Q13432 240 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 TTC23Q5W5X9 447 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 ZNF343Q6P1L6 599 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 LINC00322Q6ZN03 302 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 LRRTM1Q86UE6 522 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 SETD9Q8NE22 299 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 PHYHIPQ92561 330 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 USMG5Q96IX5 58 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 TINAGL1Q9GZM7 467 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 HIPK2Q9H2X6 1198 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 AK3Q9UIJ7 227 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 ZNF221Q9UK13 617 aa7.5□□□□□ -1.21
TRAPPC1-205ENST00000572656 A0A0A6YYD4 124 aa7.49□□□□□ -1.21
TRAPPC1-205ENST00000572656 SHISA3A0PJX4 238 aa7.49□□□□□ -1.21
TRAPPC1-205ENST00000572656 IZUMO1RA6ND01 250 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms