RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 IDNKQ5T6J7 187 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 SAMD5Q5TGI4 173 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 HACD4Q5VWC8 232 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 TEX38Q6PEX7 206 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 Q6ZS49 121 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 OR5AN1Q8NGI8 311 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 ZFP57Q9NU63 452 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 WASHC3Q9Y3C0 194 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 ETV7Q9Y603 341 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 H7C2Y5 167 aa15.84■□□□□ 0.13
NUP88-204ENST00000572290 NDUFA3O95167 84 aa15.84■□□□□ 0.13
NUP88-204ENST00000572290 GSTP1P09211 210 aaKnown RBP15.84■□□□□ 0.13
NUP88-204ENST00000572290 VDAC1P21796 283 aa15.84■□□□□ 0.13
NUP88-204ENST00000572290 C5orf64Q2M2E5 130 aa15.84■□□□□ 0.13
NUP88-204ENST00000572290 DRAXINQ8NBI3 349 aaPredicted RBP15.84■□□□□ 0.13
NUP88-204ENST00000572290 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.84■□□□□ 0.13
NUP88-204ENST00000572290 OR5H6Q8NGV6 325 aa15.84■□□□□ 0.13
NUP88-204ENST00000572290 YIPF6Q96EC8 236 aa15.84■□□□□ 0.13
NUP88-204ENST00000572290 GINS4Q9BRT9 223 aa15.84■□□□□ 0.13
NUP88-204ENST00000572290 WNK1Q9H4A3 2382 aa15.84■□□□□ 0.13
NUP88-204ENST00000572290 TMEM235A6NFC5 223 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 AIREO43918 545 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 RBBP9O75884 186 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 HLA-DRB1P01911 266 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 IGF1P05019 195 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 TFAP2AP05549 437 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 OR8U9P0C7N5 309 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 CD33P20138 364 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 PITPNAQ00169 270 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 ZNF260Q3ZCT1 412 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 PDLIM3Q53GG5 364 aaPredicted RBP15.83■□□□□ 0.12
NUP88-204ENST00000572290 LIN54Q6MZP7 749 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 WFDC9Q8NEX5 89 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 OR8U1Q8NH10 309 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 RNF5Q99942 180 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 ST6GALNAC5Q9BVH7 336 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 ZNF580Q9UK33 172 aa15.83■□□□□ 0.12
NUP88-204ENST00000572290 IGKV1D-8A0A087WSZ0 117 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 M0R1X1 148 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 TMEM127O75204 238 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 OR5H8P0DN80 308 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 GNG2P59768 71 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 BEAN1Q3B7T3 259 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 ZNF383Q8NA42 475 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 NUDCD2Q8WVJ2 157 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 SLC25A38Q96DW6 304 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 OR2D2Q9H210 308 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 DCSTAMPQ9H295 470 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 OR51J1Q9H342 316 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 GAB2Q9UQC2 676 aa15.82■□□□□ 0.12
NUP88-204ENST00000572290 RBM7Q9Y580 266 aaKnown RBP15.82■□□□□ 0.12
NUP88-204ENST00000572290 IGHV7-81A0A0B4J1V7 117 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 TRIM64CA6NLI5 447 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 NUDT19A8MXV4 375 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 RRHO14718 337 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 APOA2P02652 100 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 ELANEP08246 267 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 SLC6A1P30531 599 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 TGFBR1P36897 503 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 LINC00205P59089 165 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 CFHR3Q02985 330 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 FOXE3Q13461 319 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 OXLD1Q5BKU9 147 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 CXorf66Q5JRM2 361 aaPredicted RBP15.81■□□□□ 0.12
NUP88-204ENST00000572290 CROCCP3Q8IVE0 287 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 FBXL15Q9H469 300 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 PARP11Q9NR21 331 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 SDHAF2Q9NX18 166 aa15.81■□□□□ 0.12
NUP88-204ENST00000572290 IGHG4P01861 327 aa15.8■□□□□ 0.12
NUP88-204ENST00000572290 RPLP1P05386 114 aaKnown RBP15.8■□□□□ 0.12
NUP88-204ENST00000572290 LSM3P62310 102 aaKnown RBP15.8■□□□□ 0.12
NUP88-204ENST00000572290 PLGLAQ15195 96 aa15.8■□□□□ 0.12
NUP88-204ENST00000572290 C18orf65Q6ZTR6 163 aa15.8■□□□□ 0.12
NUP88-204ENST00000572290 PDPNQ86YL7 162 aa15.8■□□□□ 0.12
NUP88-204ENST00000572290 H1FOOQ8IZA3 346 aaPredicted RBP15.8■□□□□ 0.12
NUP88-204ENST00000572290 KLHL30-AS1Q8NEE0 82 aa15.8■□□□□ 0.12
NUP88-204ENST00000572290 SPATA2Q9UM82 520 aa15.8■□□□□ 0.12
NUP88-204ENST00000572290 TRAV18A0A075B6X5 111 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 A0A0A6YYH2 397 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 A6NJ64 397 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 ATP6V0E1O15342 81 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 SSX5O60225 188 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 CTXN2P0C2S0 81 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 KPRPQ5T749 579 aaPredicted RBP15.79■□□□□ 0.12
NUP88-204ENST00000572290 C8orf86Q6ZUL3 223 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 ZNF695Q8IW36 515 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 RNF152Q8N8N0 203 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 TSNAXQ99598 290 aaKnown RBP15.79■□□□□ 0.12
NUP88-204ENST00000572290 DIABLOQ9NR28 239 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 SLC35D1Q9NTN3 355 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 WSB1Q9Y6I7 421 aa15.79■□□□□ 0.12
NUP88-204ENST00000572290 IGKV1-16P04430 117 aa15.78■□□□□ 0.12
NUP88-204ENST00000572290 RPS19P39019 145 aaKnown RBP15.78■□□□□ 0.12
NUP88-204ENST00000572290 RPS16P62249 146 aaKnown RBP15.78■□□□□ 0.12
NUP88-204ENST00000572290 PSG5Q15238 335 aa15.78■□□□□ 0.12
NUP88-204ENST00000572290 ZNF660Q6AZW8 331 aaPredicted RBP15.78■□□□□ 0.12
NUP88-204ENST00000572290 ETV3LQ6ZN32 361 aa15.78■□□□□ 0.12
NUP88-204ENST00000572290 LCNL1Q6ZST4 164 aa15.78■□□□□ 0.12
NUP88-204ENST00000572290 FLYWCH2Q96CP2 140 aaKnown RBP15.78■□□□□ 0.12
NUP88-204ENST00000572290 METTL1Q9UBP6 276 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms