RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 Q6ZPA2 131 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 TVP23CQ96ET8 276 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 SEC11CQ9BY50 192 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 NIT2Q9NQR4 276 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 USP9XQ93008 2570 aaPredicted RBP13.68□□□□□ -0.22
RAB40B-206ENST00000571995 RAB4BP61018 213 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 GABRA6Q16445 453 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 VSIRQ9H7M9 311 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 C17orf98A8MV24 154 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 PRR33A8MZF0 331 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 SLC25A6P12236 298 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 KIR2DL2P43627 348 aaPredicted RBP13.68□□□□□ -0.22
RAB40B-206ENST00000571995 SULT1A1P50225 295 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 EIF2S3LQ2VIR3 472 aaKnown RBP13.68□□□□□ -0.22
RAB40B-206ENST00000571995 FOXL2NBQ6ZUU3 175 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 UBAC2Q8NBM4 344 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 MDS2Q8NDY4 140 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 GALNT14Q96FL9 552 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 OR4C12Q96R67 309 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 LINC00470Q9BZP3 86 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 OR51I2Q9H344 312 aa13.68□□□□□ -0.22
RAB40B-206ENST00000571995 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
RAB40B-206ENST00000571995 OR8U8P0C7N1 319 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 OR8G5Q8NG78 346 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 GNPNAT1Q96EK6 184 aaPredicted RBP13.67□□□□□ -0.22
RAB40B-206ENST00000571995 ARV1Q9H2C2 271 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
RAB40B-206ENST00000571995 PARP11Q9NR21 331 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 RND3P61587 244 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 FABP9Q0Z7S8 132 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 FFAR4Q5NUL3 377 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 ZNF880Q6PDB4 577 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 DOK5Q9P104 306 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 IGKV3D-15A0A087WSY6 115 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 MST1LQ2TV78 715 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 WDR86Q86TI4 376 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 ACY3Q96HD9 319 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 SMIM7Q9BQ49 75 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 RPRMQ9NS64 109 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 ZNRD1Q9P1U0 126 aa13.67□□□□□ -0.22
RAB40B-206ENST00000571995 ARPC4-TTLL3A0A0A6YYG9 625 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 MAP1LC3B2A6NCE7 125 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 MPZP25189 248 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 ACSF3Q4G176 576 aaPredicted RBP13.66□□□□□ -0.22
RAB40B-206ENST00000571995 Q8IYB0 196 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 MAP1LC3BQ9GZQ8 125 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 DCAF16Q9NXF7 216 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 LRRK2Q5S007 2527 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 H3BQ15 152 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 IGLV3-1P01715 115 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 RAB13P51153 203 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 FAM216BQ8N7L0 139 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 C18orf12Q96KH6 178 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 PLEKHA3Q9HB20 300 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 SERTAD4Q9NUC0 356 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 PLA2G2EQ9NZK7 142 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 ZDHHC8Q9ULC8 765 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 WIPI2Q9Y4P8 454 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 SEC11BP0C7V7 166 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 COX7A1P24310 79 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 OR10X1Q8NGY0 326 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 SSC4DQ8WTU2 575 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 LRFN3Q9BTN0 628 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 HIPK2Q9H2X6 1198 aa13.66□□□□□ -0.22
RAB40B-206ENST00000571995 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
RAB40B-206ENST00000571995 DANCRP0C864 163 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 ABHD12Q8N2K0 398 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 DTD1Q8TEA8 209 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 R3HDM4Q96D70 268 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 SNRNP40Q96DI7 357 aaKnown RBP13.65□□□□□ -0.22
RAB40B-206ENST00000571995 ATP5SQ99766 215 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 LYNX1G3V0Z9 82 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 LYNX1P0DP58 116 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 CASP6P55212 293 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 FLI1Q01543 452 aaPredicted RBP13.65□□□□□ -0.22
RAB40B-206ENST00000571995 A0A1W2PPQ1 181 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 DLX1P56177 255 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 DLK1P80370 383 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 LILRB1Q8NHL6 650 aaPredicted RBP13.65□□□□□ -0.22
RAB40B-206ENST00000571995 MARVELD3Q96A59 401 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.65□□□□□ -0.22
RAB40B-206ENST00000571995 LYRM2Q9NU23 88 aaPredicted RBP13.65□□□□□ -0.22
RAB40B-206ENST00000571995 TUBD1Q9UJT1 453 aa13.65□□□□□ -0.22
RAB40B-206ENST00000571995 IFNA1P01562 189 aa13.65□□□□□ -0.23
RAB40B-206ENST00000571995 NDRG3Q9UGV2 375 aa13.65□□□□□ -0.23
RAB40B-206ENST00000571995 ARHGAP32A7KAX9 2087 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 TRGV10A0A0A0MS01 117 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 IGHV2OR16-5A0A0B4J2B6 119 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 H0Y980 276 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 FGF16O43320 207 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 S100PP25815 95 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 CHRNA7P36544 502 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 RPL30P62888 115 aaKnown RBP13.64□□□□□ -0.23
RAB40B-206ENST00000571995 IL24Q13007 206 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 WDR25Q64LD2 544 aaPredicted RBP13.64□□□□□ -0.23
RAB40B-206ENST00000571995 RAB39BQ96DA2 213 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 TRBV6-7A0A0A0MS04 114 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 FOXI3A8MTJ6 420 aaPredicted RBP13.64□□□□□ -0.23
RAB40B-206ENST00000571995 YIF1AO95070 293 aa13.64□□□□□ -0.23
RAB40B-206ENST00000571995 NAPSAO96009 420 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms