RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 OR4A4PQ8NGN8 299 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 ABHD5Q8WTS1 349 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 PTX4Q96A99 478 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 FAM3DQ96BQ1 224 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 MGLLQ99685 303 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 SLA2Q9H6Q3 261 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 Q9N2K0 584 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 AK3Q9UIJ7 227 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 RAB22AQ9UL26 194 aa7.61□□□□□ -1.19
CIITA-207ENST00000571545 A0A1W2PN81 502 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 TRDCB7Z8K6 153 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 SOCS1O15524 211 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 DENRO43583 198 aaKnown RBP7.6□□□□□ -1.19
CIITA-207ENST00000571545 MRPS14O60783 128 aaKnown RBP7.6□□□□□ -1.19
CIITA-207ENST00000571545 CD3GP09693 182 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 CHRNA7P36544 502 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 CEACAM6P40199 344 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 VEGFCP49767 419 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 RAB9AP51151 201 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 ECSCRQ19T08 205 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 DEFB136Q30KP8 78 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 RPL39P5Q59GN2 51 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 TMEM91Q6ZNR0 172 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 ZNF429Q86V71 674 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 ZNF491Q8N8L2 437 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 OR1N2Q8NGR9 330 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 DUX3Q96PT4 197 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 AGMATQ9BSE5 352 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 PECRQ9BY49 303 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 NKX1-2Q9UD57 310 aaPredicted RBP7.6□□□□□ -1.19
CIITA-207ENST00000571545 AK6Q9Y3D8 172 aaKnown RBP7.6□□□□□ -1.19
CIITA-207ENST00000571545 WSB1Q9Y6I7 421 aa7.6□□□□□ -1.19
CIITA-207ENST00000571545 TRAV1-2A0A0B4J238 106 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 METTL21EPA6NDL7 271 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 FOXI3A8MTJ6 420 aaPredicted RBP7.59□□□□□ -1.19
CIITA-207ENST00000571545 H3BUA1 57 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 I3L521 148 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 TFAP2AP05549 437 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 CT45A6P0DMU7 189 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 CT45A5P0DMU8 189 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 CT45A7P0DMV0 189 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 RAB6AP20340 208 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 CNTFRP26992 372 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 LUMP51884 338 aaPredicted RBP7.59□□□□□ -1.19
CIITA-207ENST00000571545 ZNF260Q3ZCT1 412 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 AKIRIN2Q53H80 203 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 ACTBL2Q562R1 376 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 CD200R1LQ6Q8B3 271 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 ZNF562Q6V9R5 426 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 OR10J5Q8NHC4 309 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 FLYWCH2Q96CP2 140 aaKnown RBP7.59□□□□□ -1.19
CIITA-207ENST00000571545 RAB3CQ96E17 227 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 ARHGAP5-AS1Q96IT6 56 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 TMEM68Q96MH6 324 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 KCNK15Q9H427 330 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 FBXL15Q9H469 300 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 NDUFB11Q9NX14 153 aa7.59□□□□□ -1.19
CIITA-207ENST00000571545 ZNF256Q9Y2P7 627 aaPredicted RBP7.59□□□□□ -1.19
CIITA-207ENST00000571545 A0A0A6YYD4 124 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 LINC01619G3V211 115 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 G3V318 75 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 OVOL1O14753 267 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 FABP7O15540 132 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 SCGNO76038 276 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 LGALS1P09382 135 aaKnown RBP7.58□□□□□ -1.2
CIITA-207ENST00000571545 RRASP10301 218 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 ECI1P42126 302 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 LGALS7P47929 136 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 GABARAPL2P60520 117 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 RPS16P62249 146 aaKnown RBP7.58□□□□□ -1.2
CIITA-207ENST00000571545 CX3CL1P78423 397 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 FABP5Q01469 135 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 SRSF7Q16629 238 aaKnown RBP eCLIP7.58□□□□□ -1.2
CIITA-207ENST00000571545 RTL8BQ17RB0 113 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 C2orf76Q3KRA6 126 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 MOGAT2Q3SYC2 334 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 IZUMO2Q6UXV1 221 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 NRG4Q8WWG1 115 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 FCGR1BQ92637 280 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 ABHD14BQ96IU4 210 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 WWC2-AS2Q96NR7 200 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 GFI1Q99684 422 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 GINS4Q9BRT9 223 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 HDHD3Q9BSH5 251 aaPredicted RBP7.58□□□□□ -1.2
CIITA-207ENST00000571545 CABLES2Q9BTV7 478 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 TOLLIPQ9H0E2 274 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 C11orf54Q9H0W9 315 aaPredicted RBP7.58□□□□□ -1.2
CIITA-207ENST00000571545 Q9H521 79 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 RDH8Q9NYR8 311 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 OR1A1Q9P1Q5 309 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 METTL1Q9UBP6 276 aaKnown RBP7.58□□□□□ -1.2
CIITA-207ENST00000571545 RAB26Q9ULW5 256 aa7.58□□□□□ -1.2
CIITA-207ENST00000571545 A0A0G2JLM5 398 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 TMEM272A0A1B0GTI8 110 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 IFITM5A6NNB3 132 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 ANKRD65E5RJM6 399 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 LDLRAD4O15165 306 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 CREBL2O60519 120 aaPredicted RBP7.57□□□□□ -1.2
CIITA-207ENST00000571545 FCGR3AP08637 254 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 SCTP09683 121 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms