RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ERICH4A6NGS2 130 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 OR5H14A6NHG9 310 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 ITGB1BP1O14713 200 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 ATP6V0E1O15342 81 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 PSMB8P28062 276 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 MRPS15P82914 257 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 KIR2DS1Q14954 304 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 PLGLAQ15195 96 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 RPL39P5Q59GN2 51 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 LIN54Q6MZP7 749 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 TMEM65Q6PI78 240 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 NPBQ8NG41 125 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 OR5M8Q8NGP6 311 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 C4orf3Q8WVX3 66 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 ARHGAP5-AS1Q96IT6 56 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 RITA1Q96K30 269 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 CMSS1Q9BQ75 279 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 PECRQ9BY49 303 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 PARP12Q9H0J9 701 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 OR1A1Q9P1Q5 309 aa9.67□□□□□ -0.86
CTDNEP1-205ENST00000570828 IGHV7-81A0A0B4J1V7 117 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 TRAV41A0A0B4J266 112 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 WI2-2373I1.2A0A1W2PRP0 233 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 FOXI3A8MTJ6 420 aaPredicted RBP9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 G3V318 75 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 H7C2Y5 167 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 PDCD5O14737 125 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 DENRO43583 198 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 NDUFA3O95167 84 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 GSTP1P09211 210 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 MYL9P24844 172 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 MC5RP33032 325 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 CEACAM6P40199 344 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 TMEM50BP56557 158 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 DCTN2Q13561 401 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 C2orf76Q3KRA6 126 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 DEFB121Q5J5C9 76 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 HES5Q5TA89 166 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 ABHD14BQ96IU4 210 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 C11orf54Q9H0W9 315 aaPredicted RBP9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 Q9N2K0 584 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 WASHC3Q9Y3C0 194 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 WSB1Q9Y6I7 421 aa9.66□□□□□ -0.86
CTDNEP1-205ENST00000570828 TMEM272A0A1B0GTI8 110 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 H0YJW9 148 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 LDLRAD4O15165 306 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 RBBP9O75884 186 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 SCTP09683 121 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 CD3GP09693 182 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 CT45A6P0DMU7 189 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 CT45A5P0DMU8 189 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 CT45A7P0DMV0 189 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 SSX1Q16384 188 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 ECSCRQ19T08 205 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 PLAC9Q5JTB6 97 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 GLDNQ6ZMI3 551 aaPredicted RBP9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 ABHD5Q8WTS1 349 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 RAB3CQ96E17 227 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 AGMATQ9BSE5 352 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 SSBP4Q9BWG4 385 aaPredicted RBP9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 FBXL15Q9H469 300 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 NDUFB11Q9NX14 153 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 ZNF221Q9UK13 617 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 RAB22AQ9UL26 194 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 RAB26Q9ULW5 256 aa9.65□□□□□ -0.86
CTDNEP1-205ENST00000570828 TRAV1-2A0A0B4J238 106 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 TRDCB7Z8K6 153 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 RRHO14718 337 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 GADD45AP24522 165 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 PPIFP30405 207 aaKnown RBP9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 SERPINB10P48595 397 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 LUMP51884 338 aaPredicted RBP9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR10A3P58181 314 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 GABARAPL2P60520 117 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 DGCR2P98153 550 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 NDPQ00604 133 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 FHL3Q13643 280 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 C9orf66Q5T8R8 295 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 ZNF660Q6AZW8 331 aaPredicted RBP9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR5AN1Q8NGI8 311 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 MYOZ3Q8TDC0 251 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 PTX4Q96A99 478 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 UBE2E2Q96LR5 201 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 KLK15Q9H2R5 256 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 RNF150Q9ULK6 438 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 VSIG4Q9Y279 399 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 A3GALT2U3KPV4 340 aa9.64□□□□□ -0.87
CTDNEP1-205ENST00000570828 IGKV1-6A0A0C4DH72 117 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 IFITM5A6NNB3 132 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 SEC14L6B5MCN3 397 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 EREGO14944 169 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 BET1O15155 118 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 FABP7O15540 132 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 IGLV1-40P01703 118 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 APOA2P02652 100 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 TFAP2AP05549 437 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR8U8P0C7N1 319 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 RAB3BP20337 219 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 CD69Q07108 199 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 PLA2G7Q13093 441 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms