RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 MRGPRGQ86SM5 289 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 J3QT63 122 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 FCGR3BO75015 233 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 PTBP3O95758 552 aaKnown RBP12.97□□□□□ -0.33
USP43-202ENST00000570475 TMEM41BQ5BJD5 291 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 SIRT7Q9NRC8 400 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 FOXJ2Q9P0K8 574 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 POLDIP2Q9Y2S7 368 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 DSPP15924 2871 aaKnown RBP12.97□□□□□ -0.33
USP43-202ENST00000570475 OR5B21A6NL26 309 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 GCSAMLQ5JQS6 135 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 PRAMEF5Q5TYX0 476 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 DEFB108BQ8NET1 73 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 DTD1Q8TEA8 209 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 POM121L2Q96KW2 1035 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 TRIB1Q96RU8 372 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 TREM2Q9NZC2 230 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 DVL1O14640 695 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 SSTR5P35346 364 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 RAB4BP61018 213 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 SSMEM1Q8WWF3 244 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 ACTR3CQ9C0K3 210 aaPredicted RBP12.96□□□□□ -0.33
USP43-202ENST00000570475 SMDT1Q9H4I9 107 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 GCM1Q9NP62 436 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 DMRT1Q9Y5R6 373 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 MPC1Q9Y5U8 109 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 PLCE1Q9P212 2302 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 IGKV1-39P01597 117 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 IGKV1D-39P04432 117 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 COX5AP20674 150 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 CCL11P51671 97 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 ZNF726P1Q15940 193 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 RPP25LQ8N5L8 163 aaKnown RBP12.96□□□□□ -0.33
USP43-202ENST00000570475 RAB24Q969Q5 203 aa12.96□□□□□ -0.33
USP43-202ENST00000570475 IFITM10A6NMD0 228 aa12.96□□□□□ -0.34
USP43-202ENST00000570475 HAND1O96004 215 aa12.96□□□□□ -0.34
USP43-202ENST00000570475 IGHV2-70P01814 119 aa12.96□□□□□ -0.34
USP43-202ENST00000570475 LHX2P50458 406 aa12.96□□□□□ -0.34
USP43-202ENST00000570475 COL10A1Q03692 680 aa12.96□□□□□ -0.34
USP43-202ENST00000570475 FAM90A2PQ658T7 463 aa12.96□□□□□ -0.34
USP43-202ENST00000570475 WDR61Q9GZS3 305 aaKnown RBP12.96□□□□□ -0.34
USP43-202ENST00000570475 PARLQ9H300 379 aa12.96□□□□□ -0.34
USP43-202ENST00000570475 NAT8Q9UHE5 227 aa12.96□□□□□ -0.34
USP43-202ENST00000570475 RNF115Q9Y4L5 304 aa12.96□□□□□ -0.34
USP43-202ENST00000570475 RNF212BA8MTL3 300 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 C1QTNF9BB2RNN3 333 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 P2RY6Q15077 328 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 DCAF10Q5QP82 559 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 ZNF703Q9H7S9 590 aaPredicted RBP12.95□□□□□ -0.34
USP43-202ENST00000570475 ACACAQ13085 2346 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 ARFGEF3Q5TH69 2177 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 C17orf98A8MV24 154 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 NEURL1O76050 574 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 ACTL6BO94805 426 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 SNRPCP09234 159 aaKnown RBP12.95□□□□□ -0.34
USP43-202ENST00000570475 HOXB1P14653 301 aaPredicted RBP12.95□□□□□ -0.34
USP43-202ENST00000570475 PAX6P26367 422 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 GFRA1P56159 465 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 TRA2AQ13595 282 aaKnown RBP eCLIP12.95□□□□□ -0.34
USP43-202ENST00000570475 ODF3L1Q8IXM7 274 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 HIST3H2BBQ8N257 126 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 OR4X1Q8NH49 305 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 PINX1Q96BK5 328 aaKnown RBP12.95□□□□□ -0.34
USP43-202ENST00000570475 SDF2L1Q9HCN8 221 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.95□□□□□ -0.34
USP43-202ENST00000570475 DMDP11532 3685 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 KLRC4-KLRK1H3BQV0 150 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 CD46P15529 392 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 THBS3P49746 956 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 CLDN18P56856 261 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 PNRC1Q12796 327 aaPredicted RBP12.95□□□□□ -0.34
USP43-202ENST00000570475 CA5BP1Q8WTZ4 195 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 LEAP2Q969E1 77 aa12.95□□□□□ -0.34
USP43-202ENST00000570475 MUC3AQ02505 3323 aa12.94□□□□□ -0.34
USP43-202ENST00000570475 PPIHO43447 177 aaKnown RBP12.94□□□□□ -0.34
USP43-202ENST00000570475 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
USP43-202ENST00000570475 TNFRSF9Q07011 255 aa12.94□□□□□ -0.34
USP43-202ENST00000570475 OR4A16Q8NH70 328 aa12.94□□□□□ -0.34
USP43-202ENST00000570475 WDYHV1Q96HA8 205 aa12.94□□□□□ -0.34
USP43-202ENST00000570475 CISD1Q9NZ45 108 aaKnown RBP12.94□□□□□ -0.34
USP43-202ENST00000570475 TNFSF15O95150 251 aa12.94□□□□□ -0.34
USP43-202ENST00000570475 HBZP02008 142 aa12.94□□□□□ -0.34
USP43-202ENST00000570475 G0S2P27469 103 aa12.94□□□□□ -0.34
USP43-202ENST00000570475 MPLP40238 635 aa12.94□□□□□ -0.34
USP43-202ENST00000570475 ZFP36L1Q07352 338 aaKnown RBP12.94□□□□□ -0.34
USP43-202ENST00000570475 ACSM6Q6P461 480 aa12.94□□□□□ -0.34
USP43-202ENST00000570475 TRGV5A0A0B4J1U4 118 aa12.93□□□□□ -0.34
USP43-202ENST00000570475 DUXBA0A1W2PPF3 345 aa12.93□□□□□ -0.34
USP43-202ENST00000570475 ODAMA1E959 279 aa12.93□□□□□ -0.34
USP43-202ENST00000570475 ZNF729A6NN14 1252 aaPredicted RBP12.93□□□□□ -0.34
USP43-202ENST00000570475 NDUFB4O95168 129 aa12.93□□□□□ -0.34
USP43-202ENST00000570475 GYPAP02724 150 aa12.93□□□□□ -0.34
USP43-202ENST00000570475 GCH1P30793 250 aa12.93□□□□□ -0.34
USP43-202ENST00000570475 RPL30P62888 115 aaKnown RBP12.93□□□□□ -0.34
USP43-202ENST00000570475 HAPLN4Q86UW8 402 aa12.93□□□□□ -0.34
USP43-202ENST00000570475 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
USP43-202ENST00000570475 TMEM30CPA0ZSE6 113 aa12.93□□□□□ -0.34
USP43-202ENST00000570475 M0R1X1 148 aa12.93□□□□□ -0.34
USP43-202ENST00000570475 PSPNO60542 156 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms