RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 OR52L2PQ8NGH6 319 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 MRGPRDQ8TDS7 321 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 RSG1Q9BU20 258 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 MIOXQ9UGB7 285 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 NDRG3Q9UGV2 375 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 H0Y980 276 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 SH2D1BO14796 132 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 H2AFB1P0C5Y9 115 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 ID3Q02535 119 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 TESK1Q15569 626 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 AKR1C8PQ5T2L2 129 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 ODF3L1Q8IXM7 274 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 ZDHHC11Q9H8X9 412 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 GP6Q9HCN6 339 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 POLDIP2Q9Y2S7 368 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 C7orf77A4D0Y5 90 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 LRP5LA4QPB2 252 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 HAND1O96004 215 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 IGKV1-39P01597 117 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 IGKV1D-39P04432 117 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 IL2RGP31785 369 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 NHLH1Q02575 133 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 GABRA6Q16445 453 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 OR8G2PQ6IF36 304 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 OR10A7Q8NGE5 316 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 OR5D13Q8NGL4 314 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 DCTN5Q9BTE1 182 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 PARD6AQ9NPB6 346 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 METRNQ9UJH8 293 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 ROS1P08922 2347 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 FAM157AC9JC47 383 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 PAX9P55771 341 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 RND3P61587 244 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 AVPI1Q5T686 147 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 S100A7AQ86SG5 101 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 RBMXL1Q96E39 390 aaKnown RBP7.38□□□□□ -1.23
LINC00558-201ENST00000569422 PBDC1Q9BVG4 233 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 PKIBQ9C010 78 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 FAM234AQ9H0X4 552 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 OR2D2Q9H210 308 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 ARV1Q9H2C2 271 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 KPTNQ9Y664 436 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 HMGB3O15347 200 aaKnown RBP7.38□□□□□ -1.23
LINC00558-201ENST00000569422 MLNRO43193 412 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 RAMP3O60896 148 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 FGF8P55075 233 aaPredicted RBP7.38□□□□□ -1.23
LINC00558-201ENST00000569422 RPL23AP62750 156 aaKnown RBP7.38□□□□□ -1.23
LINC00558-201ENST00000569422 LCN15Q6UWW0 184 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 Q6ZS49 121 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 FAM24BQ8N5W8 94 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF610Q8N9Z0 462 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 C14orf144Q96I85 54 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 SMCO4Q9NRQ5 59 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 PSENENQ9NZ42 101 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 KCNIP1Q9NZI2 227 aa7.38□□□□□ -1.23
LINC00558-201ENST00000569422 COL27A1Q8IZC6 1860 aaPredicted RBP7.38□□□□□ -1.23
LINC00558-201ENST00000569422 CUL9Q8IWT3 2517 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 K7N7A8 449 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 PITX3O75364 302 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 SAP30O75446 220 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 IGLV2-14P01704 120 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 G6PCP35575 357 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 KIR2DL2P43627 348 aaPredicted RBP7.37□□□□□ -1.23
LINC00558-201ENST00000569422 ELLP55199 621 aaPredicted RBP7.37□□□□□ -1.23
LINC00558-201ENST00000569422 OR2B8PP59922 312 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 SOHLH1Q5JUK2 328 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 ADAM5Q6NVV9 412 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF497Q6ZNH5 498 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF561Q8N587 486 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 DRAM1Q8N682 238 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 LRFN3Q9BTN0 628 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 TP53TG5Q9Y2B4 290 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 STRAPQ9Y3F4 350 aaKnown RBP7.37□□□□□ -1.23
LINC00558-201ENST00000569422 ZFP92A6NM28 416 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 BRI3O95415 125 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 IFNA5P01569 189 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 IGKV1-5P01602 117 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 CECR9P0C854 216 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 PGA5P0DJD9 388 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 SSTR5P35346 364 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 GLIPR1P48060 266 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 Q6ZT83 130 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 ABHD14BQ96IU4 210 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 SLC35B3Q9H1N7 401 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 VCX2Q9H322 139 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 VSIRQ9H7M9 311 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 TREM2Q9NZC2 230 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 URGCP-MRPS24S4R325 110 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 PIEZO2Q9H5I5 2752 aa7.37□□□□□ -1.23
LINC00558-201ENST00000569422 COLCA2A8K830 154 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF727A8MUV8 499 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 SYNGR2O43760 224 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 CLDN1O95832 211 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 SNRPEP62304 92 aaKnown RBP7.36□□□□□ -1.23
LINC00558-201ENST00000569422 ARL16Q0P5N6 197 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 OXLD1Q5BKU9 147 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 Q6ZR03 302 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 LINC00596Q86U02 117 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 TGIF2LXQ8IUE1 241 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 FGFRL1Q8N441 504 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms