RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 HIST1H1DP16402 221 aaKnown RBP7.31□□□□□ -1.24
CAPN3-219ENST00000569136 GNB3P16520 340 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 MC5RP33032 325 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 PPP1CCP36873 323 aaKnown RBP7.31□□□□□ -1.24
CAPN3-219ENST00000569136 VDAC2P45880 294 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-219ENST00000569136 DIAPH2-AS1Q14236 149 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 HNF4GQ14541 408 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 ICAM4Q14773 271 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 FAM71F2Q6NXP2 309 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 Q6ZS49 121 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 CENPVQ7Z7K6 275 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-219ENST00000569136 NR2C2APQ86WQ0 139 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 YIPF6Q96EC8 236 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 TOLLIPQ9H0E2 274 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.31□□□□□ -1.24
CAPN3-219ENST00000569136 DIABLOQ9NR28 239 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 SERTAD4Q9NUC0 356 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 KCNK7Q9Y2U2 307 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 MOB4Q9Y3A3 225 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 NOTCH3Q9UM47 2321 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 TRRAPQ9Y4A5 3859 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 NCBP2LA6PVI3 153 aaKnown RBP7.3□□□□□ -1.24
CAPN3-219ENST00000569136 MFNGO00587 321 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 SLC31A2O15432 143 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 FABP7O15540 132 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 AMY1AP04745 511 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 SCTP09683 121 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 DTYMKP23919 212 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 REG1BP48304 166 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 KRTAP10-3P60369 221 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 HLA-DRB3P79483 266 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 SRSF4Q08170 494 aaKnown RBP7.3□□□□□ -1.24
CAPN3-219ENST00000569136 ARFRP1Q13795 201 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 PNLIPRP3Q17RR3 467 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 C2orf68Q2NKX9 166 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 ABCA11PQ4W5N1 156 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 IDNKQ5T6J7 187 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 HACD4Q5VWC8 232 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 KLHDC1Q8N7A1 406 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 OR10J5Q8NHC4 309 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 C8orf49Q96NF6 230 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 RNF5Q99942 180 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 AGMATQ9BSE5 352 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 HDHD3Q9BSH5 251 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-219ENST00000569136 ZNF221Q9UK13 617 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 GAB2Q9UQC2 676 aa7.3□□□□□ -1.24
CAPN3-219ENST00000569136 A0A075B6Q4 140 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 A0A0B4J203 849 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 RBBP9O75884 186 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 OPN1MWP04001 364 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 OPN1MW2P0DN77 364 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 OPN1MW3P0DN78 364 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 MXD1Q05195 221 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 PLA2G7Q13093 441 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 GNMTQ14749 295 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 MOGAT2Q3SYC2 334 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 FAM53AQ6NSI3 398 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-219ENST00000569136 ZNF833PQ6ZTB9 187 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 ODF3L1Q8IXM7 274 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 Q8N6K4 173 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-219ENST00000569136 OR5AU1Q8NGC0 362 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 CHPT1Q8WUD6 406 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 S100A16Q96FQ6 103 aaKnown RBP7.29□□□□□ -1.24
CAPN3-219ENST00000569136 RASL11BQ9BPW5 248 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 GON7Q9BXV9 100 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 C11orf54Q9H0W9 315 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-219ENST00000569136 MMP27Q9H306 513 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 PLSCR3Q9NRY6 295 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 LIN7CQ9NUP9 197 aaKnown RBP7.29□□□□□ -1.24
CAPN3-219ENST00000569136 RHBDL2Q9NX52 303 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 SPATA2Q9UM82 520 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 DSCAML1Q8TD84 2053 aa7.29□□□□□ -1.24
CAPN3-219ENST00000569136 TRBV6-7A0A0A0MS04 114 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 IGHV3-72A0A0B4J1Y9 119 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 SMIM30A4D0T7 59 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 OR5H14A6NHG9 310 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 KCNAB3O43448 404 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 IGHG2P01859 326 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 FCGR3AP08637 254 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 CSF1P09603 554 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 GSTT2P0CG29 244 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 GSTT2BP0CG30 244 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 C9orf152Q5JTZ5 239 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 Q6ZPA2 131 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 NDUFA11Q86Y39 141 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 FOXRED2Q8IWF2 684 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 COMMD1Q8N668 190 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 C5orf56Q8N8D9 126 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 WIPF2Q8TF74 440 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-219ENST00000569136 CMTM3Q96MX0 182 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 ZNF251Q9BRH9 671 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 GINS4Q9BRT9 223 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 ST6GALNAC5Q9BVH7 336 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 KRTAP9-9Q9BYP9 154 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 KRTAP9-4Q9BYQ2 154 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 ABCG5Q9H222 651 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 IFI27L2Q9H2X8 130 aa7.28□□□□□ -1.24
CAPN3-219ENST00000569136 RNF167Q9H6Y7 350 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms