RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CEACAM21Q3KPI0 293 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 SPIN4Q56A73 249 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 TEX43Q6ZNM6 134 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 C6orf120Q7Z4R8 191 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 ZNF429Q86V71 674 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 LRP11Q86VZ4 500 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 Q8N402 240 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 OR13C9Q8NGT0 318 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 OR2A1Q8NGT9 310 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 APH1BQ8WW43 257 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 RGP1Q92546 391 aaPredicted RBP3.81□□□□□ -1.8
UBR1-208ENST00000569066 DIRAS2Q96HU8 199 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 SLC25A31Q9H0C2 315 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 ARL6Q9H0F7 186 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 PRSS16Q9NQE7 514 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 UBQLN4Q9NRR5 601 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 TMEM38BQ9NVV0 291 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 SLC23A2Q9UGH3 650 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 C14orf166Q9Y224 244 aaKnown RBP3.81□□□□□ -1.8
UBR1-208ENST00000569066 TPRKBQ9Y3C4 175 aa3.81□□□□□ -1.8
UBR1-208ENST00000569066 TULP4Q9NRJ4 1543 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 CDC42BPBQ9Y5S2 1711 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 LAMA4Q16363 1823 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 KIF13BQ9NQT8 1826 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 LRP4O75096 1905 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 LYRM9A8MSI8 78 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 H7C1H1 209 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 PDE6DO43924 150 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 FARS2O95363 451 aaKnown RBP3.8□□□□□ -1.8
UBR1-208ENST00000569066 LSM8O95777 96 aaKnown RBP3.8□□□□□ -1.8
UBR1-208ENST00000569066 MT-CO2P00403 227 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 OR5G3P0C626 314 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 HTR2CP28335 458 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 KDELR2P33947 212 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 RAB38P57729 211 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 HBA1P69905 142 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 TCP10Q12799 353 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 PRSS54Q6PEW0 395 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 WDR82Q6UXN9 313 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 HEPN1Q6WQI6 88 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 ZNF547Q8IVP9 402 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 ARIH2OSQ8N7S6 290 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 C8orf31Q8N9H6 132 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 OR4E2Q8NGC2 313 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 OR13C4Q8NGS5 318 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 SFXN5Q8TD22 340 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 LRRC29Q8WV35 223 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 YPEL4Q96NS1 127 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 IP6K3Q96PC2 410 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 GINS4Q9BRT9 223 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 MS4A8Q9BY19 250 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 JPT1Q9UK76 154 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 VPREB3Q9UKI3 123 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 MADDQ8WXG6 1647 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 DISP2A7MBM2 1401 aa3.8□□□□□ -1.8
UBR1-208ENST00000569066 WI2-2373I1.2A0A1W2PRP0 233 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 OR7C2O60412 319 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 CDRT1O95170 752 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 SMIM10L1P0DMW3 83 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 SSTR5P35346 364 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 CDKN2BP42772 138 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 UBE2KP61086 200 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 RHOGP84095 191 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 TNXAQ16473 311 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 PRSS8Q16651 343 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 FAM45BPQ6NSW5 357 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 OR8I2Q8N0Y5 310 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 LINC00471Q8N535 108 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 SPICQ8N5J4 248 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 ZNF738Q8NE65 137 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 OR4K2Q8NGD2 314 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 OR52L1Q8NGH7 329 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 TSLPQ969D9 159 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 PTX4Q96A99 478 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 SMIM10Q96HG1 83 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 MRPL57Q9BQC6 102 aaKnown RBP3.79□□□□□ -1.8
UBR1-208ENST00000569066 GTSF1LQ9H1H1 148 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 FLVCR2Q9UPI3 526 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 CITO14578 2027 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 IQGAP3Q86VI3 1631 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 F5H5T6 163 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 H0Y980 276 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 TRAPPC2LH3BP13 241 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 GABRPO00591 440 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 ALOX12BO75342 701 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 RAB36O95755 333 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 GCGP01275 180 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 HBE1P02100 147 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 GABRG2P18507 467 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 TBPL1P62380 186 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 ZNF266Q14584 549 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 MMDQ15546 238 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 MORN2Q502X0 79 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 SPIN3Q5JUX0 258 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 STEAP4Q687X5 459 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 OR10K2Q6IF99 312 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 UNQ5815/PRO19632Q6UWF5 114 aa3.79□□□□□ -1.8
UBR1-208ENST00000569066 HIST2H3AQ71DI3 136 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms