RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 FAM214BQ7L5A3 538 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 C1orf87Q8N0U7 546 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 PRR7Q8TB68 274 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 TRIB1Q96RU8 372 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 MRPL37Q9BZE1 423 aaKnown RBP14.07□□□□□ -0.16
CMTM3-213ENST00000566756 VSIRQ9H7M9 311 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 DOK5Q9P104 306 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 ESPL1Q14674 2120 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 ELOA3CA0A087WX78 387 aaPredicted RBP14.07□□□□□ -0.16
CMTM3-213ENST00000566756 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.07□□□□□ -0.16
CMTM3-213ENST00000566756 MAP1LC3B2A6NCE7 125 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 OOEPA6NGQ2 149 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 ZFP92A6NM28 416 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 K7ENP7 123 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 MBP02144 154 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 CRYABP02511 175 aaKnown RBP14.07□□□□□ -0.16
CMTM3-213ENST00000566756 ZNF16P17020 682 aaPredicted RBP14.07□□□□□ -0.16
CMTM3-213ENST00000566756 CATR1Q13166 79 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 SPANXN5Q5MJ07 72 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 ZNF343Q6P1L6 599 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 LCN15Q6UWW0 184 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 PRR18Q8N4B5 295 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 MAP1LC3BQ9GZQ8 125 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 LAMP3Q9UQV4 416 aa14.07□□□□□ -0.16
CMTM3-213ENST00000566756 TRBV24-1A0A075B6N3 115 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 TRAV39A0A0B4J263 110 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 SEC14L6B5MCN3 397 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 OPN1MWP04001 364 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 OPN1MW2P0DN77 364 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 OPN1MW3P0DN78 364 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 NCMAPQ5T1S8 102 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 SLC25A40Q8TBP6 338 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 BCL2L14Q9BZR8 327 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 RBKSQ9H477 322 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 MIOXQ9UGB7 285 aa14.06□□□□□ -0.16
CMTM3-213ENST00000566756 LINC00587B1AMM8 73 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 MYPOPQ86VE0 399 aaPredicted RBP14.05□□□□□ -0.16
CMTM3-213ENST00000566756 CIB3Q96Q77 187 aaPredicted RBP14.05□□□□□ -0.16
CMTM3-213ENST00000566756 TMEM147Q9BVK8 224 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.05□□□□□ -0.16
CMTM3-213ENST00000566756 GAR1Q9NY12 217 aaKnown RBP14.05□□□□□ -0.16
CMTM3-213ENST00000566756 TGIF2-C20orf24A0A0A6YYL0 155 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 K7EM74 188 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 CYB5BO43169 146 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST1H2BKO60814 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 LY86O95711 162 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 IGHV2-70P01814 119 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST1H2BJP06899 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 CELA3BP08861 270 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 IGHV1-2P23083 117 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST1H2BOP23527 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST1H2BBP33778 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST1H2BDP58876 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST1H2BCP62807 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 PSG7Q13046 419 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 IGFBP7Q16270 282 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST2H2BEQ16778 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.05□□□□□ -0.16
CMTM3-213ENST00000566756 DNLZQ5SXM8 178 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 SSX7Q7RTT5 188 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 FAM216AQ8WUB2 273 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST1H2BHQ93079 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 FAM210BQ96KR6 192 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST1H2BNQ99877 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 HIST1H2BMQ99879 126 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 GGACTQ9BVM4 153 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 SLC39A9Q9NUM3 307 aa14.05□□□□□ -0.16
CMTM3-213ENST00000566756 LRRC30A6NM36 301 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 C12orf77C9JDV5 145 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 C3orf80F5H4A9 247 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 TMEM250H0YL14 139 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 RAB29O14966 203 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 S100A2P29034 98 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 IDH3GP51553 393 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-213ENST00000566756 PAX5Q02548 391 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 WDR25Q64LD2 544 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-213ENST00000566756 WDR31Q8NA23 367 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 NAT8Q9UHE5 227 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 URGCP-MRPS24S4R325 110 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 SVILO95425 2214 aa14.04□□□□□ -0.16
CMTM3-213ENST00000566756 IFNL4K9M1U5 179 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 CLDN14O95500 239 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 CLDN1O95832 211 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 IL2RGP31785 369 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 NDUFA6P56556 154 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 VWC2Q2TAL6 325 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 KRTCAP3Q53RY4 240 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 ZNF66Q6ZN08 573 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 CYP2G1PQ6ZSU1 146 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 Q6ZT83 130 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 LURAP1LQ8IV03 231 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 LHX4Q969G2 390 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 ABHD17AQ96GS6 310 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 OR2D2Q9H210 308 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 DMRT1Q9Y5R6 373 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 FRYQ5TBA9 3013 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 CTXND1A0A1B0GTU2 59 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 UBE2L5PA0A1B0GUS4 154 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 IFITM10A6NMD0 228 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 PMS2P5A8MQ11 134 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms