RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 ZNF66Q6ZN08 573 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 C1orf122Q6ZSJ8 110 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 C11orf42Q8N5U0 333 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 LINC00311Q8N616 119 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 KIR3DL3Q8N743 410 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 UXS1Q8NBZ7 420 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 OR11H7Q8NGC8 314 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 PIPOXQ9P0Z9 390 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 MGAT4CQ9UBM8 478 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 RNF150Q9ULK6 438 aa15.63■□□□□ 0.09
CSPG4P13-201ENST00000565545 DBX1A6NMT0 343 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 H0Y980 276 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 OR5AC1P0C628 307 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 F2RP25116 425 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 ZNF134P52741 427 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 CT45A1Q5HYN5 189 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 LIN54Q6MZP7 749 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 SLC25A48Q6ZT89 311 aaKnown RBP15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 TCTEX1D1Q8N7M0 179 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 LRTM2Q8N967 370 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 CT45A3Q8NHU0 189 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 ZNF596Q8TC21 504 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 ST6GAL2Q96JF0 529 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 HSD17B10Q99714 261 aaKnown RBP15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 IFI27L2Q9H2X8 130 aa15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 POLR3KQ9Y2Y1 108 aaPredicted RBP15.62■□□□□ 0.09
CSPG4P13-201ENST00000565545 ZANQ9Y493 2812 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 RNF223E7ERA6 249 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 RAB29O14966 203 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 ERVFRD-1P60508 538 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 CATR1Q13166 79 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 EIF4EBP1Q13541 118 aaPredicted RBP15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 CLEC12BQ2HXU8 276 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 ANKRD55Q3KP44 614 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 LIAT1Q6ZQX7 453 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 LGI3Q8N145 548 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 MAPK1IP1LQ8NDC0 245 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 OR9G1Q8NH87 305 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 GLYATL2Q8WU03 294 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 TNFRSF14Q92956 283 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 ABHD14BQ96IU4 210 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 ZNF436Q9C0F3 470 aaPredicted RBP15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 TMEM222Q9H0R3 208 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 TMEM133Q9H2Q1 129 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 RAB18Q9NP72 206 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 FAM212BQ9NTI7 297 aaPredicted RBP15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 LIN7CQ9NUP9 197 aaKnown RBP15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 SDHAF2Q9NX18 166 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 STAB1Q9NY15 2570 aa15.61■□□□□ 0.09
CSPG4P13-201ENST00000565545 CXCL3P19876 107 aa15.6■□□□□ 0.09
CSPG4P13-201ENST00000565545 UCP1P25874 307 aa15.6■□□□□ 0.09
CSPG4P13-201ENST00000565545 CD83Q01151 205 aa15.6■□□□□ 0.09
CSPG4P13-201ENST00000565545 TCTE3Q8IZS6 198 aa15.6■□□□□ 0.09
CSPG4P13-201ENST00000565545 IL22RA2Q969J5 263 aa15.6■□□□□ 0.09
CSPG4P13-201ENST00000565545 MSI2Q96DH6 328 aaKnown RBP15.6■□□□□ 0.09
CSPG4P13-201ENST00000565545 TMEM56Q96MV1 263 aa15.6■□□□□ 0.09
CSPG4P13-201ENST00000565545 ONECUT1Q9UBC0 465 aa15.6■□□□□ 0.09
CSPG4P13-201ENST00000565545 TMEM56-RWDD3S4R434 201 aa15.6■□□□□ 0.09
CSPG4P13-201ENST00000565545 IGHV4-30-2A0A087WSY4 118 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 DUXBA0A1W2PPF3 345 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 GOSR2O14653 212 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 SLC31A2O15432 143 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 TNFSF12O43508 249 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 OR2A4O95047 310 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 GIPP09681 153 aaPredicted RBP15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 OR5M8Q8NGP6 311 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 LEAP2Q969E1 77 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 OR2A7Q96R45 310 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 TP53RKQ96S44 253 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 S1PR3Q99500 378 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 RANGRFQ9HD47 186 aaPredicted RBP15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 KPTNQ9Y664 436 aa15.59■□□□□ 0.09
CSPG4P13-201ENST00000565545 SONP18583 2426 aaKnown RBP15.58■□□□□ 0.09
CSPG4P13-201ENST00000565545 IGHV4-61A0A0C4DH41 118 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 IGHV2-70DA0A0C4DH43 119 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 J3QR06 171 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 CDS2O95674 445 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 ZFP36P26651 326 aaKnown RBP15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 GNG10P50151 68 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 PRRX1P54821 245 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 PAX2Q02962 417 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 KRTAP1-1Q07627 177 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 SRSF4Q08170 494 aaKnown RBP15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 SP6Q3SY56 376 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 FAM71F2Q6NXP2 309 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 LYG1Q8N1E2 194 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 ABHD12Q8N2K0 398 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 C5orf30Q96GV9 206 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 ADTRPQ96IZ2 230 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 REG4Q9BYZ8 158 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 METTL8Q9H825 291 aaKnown RBP15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 YAE1D1Q9NRH1 226 aa15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 FBN1P35555 2871 aaKnown RBP15.58■□□□□ 0.08
CSPG4P13-201ENST00000565545 TOR1AO14656 332 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 IFNA21P01568 189 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 IGHV3-7P01780 117 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 RPA2P15927 270 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 PRTN3P24158 256 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 IL3RAP26951 378 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 RAP2BP61225 183 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms