RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 GNB1P62873 340 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 FABP5Q01469 135 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 KIAA0141Q14154 515 aaPredicted RBP4.99□□□□□ -1.61
TCF4-228ENST00000565393 IRF3Q14653 427 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 PSG5Q15238 335 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 HES5Q5TA89 166 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 ZNF880Q6PDB4 577 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 UNQ5815/PRO19632Q6UWF5 114 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 ZNF562Q6V9R5 426 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 MOB1BQ7L9L4 216 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 MINDY2Q8NBR6 621 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 LFNGQ8NES3 379 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 OR5AN1Q8NGI8 311 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 NRG4Q8WWG1 115 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 DCUN1D4Q92564 292 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 FLYWCH2Q96CP2 140 aaKnown RBP4.99□□□□□ -1.61
TCF4-228ENST00000565393 RAB3CQ96E17 227 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 ARHGAP5-AS1Q96IT6 56 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 CNBD2Q96M20 576 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 RNF5Q99942 180 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 AGMATQ9BSE5 352 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 FAM103A1Q9BTL3 118 aaKnown RBP4.99□□□□□ -1.61
TCF4-228ENST00000565393 PARP12Q9H0J9 701 aaKnown RBP4.99□□□□□ -1.61
TCF4-228ENST00000565393 ALX4Q9H161 411 aaPredicted RBP4.99□□□□□ -1.61
TCF4-228ENST00000565393 VCX3BQ9H321 246 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 ACOT13Q9NPJ3 140 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 C12orf4Q9NQ89 552 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 RDH8Q9NYR8 311 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 ZNF580Q9UK33 172 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 RAB22AQ9UL26 194 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 ZNF256Q9Y2P7 627 aaPredicted RBP4.99□□□□□ -1.61
TCF4-228ENST00000565393 RBM7Q9Y580 266 aaKnown RBP4.99□□□□□ -1.61
TCF4-228ENST00000565393 NUBP2Q9Y5Y2 271 aa4.99□□□□□ -1.61
TCF4-228ENST00000565393 A0A075B6Q4 140 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 TRBV6-6A0A0A6YYG2 114 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 METTL21EPA6NDL7 271 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 LINC01619G3V211 115 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 I3L521 148 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 M0R1X1 148 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 ITGB1BP1O14713 200 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 OVOL1O14753 267 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 RBBP9O75884 186 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 NDUFA3O95167 84 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 IGHV3-11P01762 117 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 APOA2P02652 100 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 TFAP2AP05549 437 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 GSTT2P0CG29 244 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 GSTT2BP0CG30 244 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 EGR2P11161 476 aaPredicted RBP4.98□□□□□ -1.61
TCF4-228ENST00000565393 CRHBPP24387 322 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 TPPP2P59282 170 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 HLA-DRB3P79483 266 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 MLLT11Q13015 90 aaPredicted RBP4.98□□□□□ -1.61
TCF4-228ENST00000565393 CBX3Q13185 183 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 FXYD3Q14802 87 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 AKIRIN2Q53H80 203 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 ACTBL2Q562R1 376 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 PLAC9Q5JTB6 97 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 FAM71F2Q6NXP2 309 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 PRSS48Q7RTY5 328 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 ZNF429Q86V71 674 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 OR5T1Q8NG75 326 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 OR10J5Q8NHC4 309 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 DLX4Q92988 240 aaPredicted RBP4.98□□□□□ -1.61
TCF4-228ENST00000565393 PTX4Q96A99 478 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 WWC2-AS2Q96NR7 200 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 OR4C12Q96R67 309 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 TSNAXQ99598 290 aaKnown RBP4.98□□□□□ -1.61
TCF4-228ENST00000565393 GFI1Q99684 422 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 FOXA2Q9Y261 457 aaPredicted RBP4.98□□□□□ -1.61
TCF4-228ENST00000565393 FBXO7Q9Y3I1 522 aa4.98□□□□□ -1.61
TCF4-228ENST00000565393 LSM4Q9Y4Z0 139 aaKnown RBP4.98□□□□□ -1.61
TCF4-228ENST00000565393 IGKV1-6A0A0C4DH72 117 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 C13orf42A0A1B0GVH6 325 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 J3QRK9 145 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 FABP7O15540 132 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 SLC25A17O43808 307 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 SOX15O60248 233 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 PROP1O75360 226 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 CA2P00918 260 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 TRGV3P03979 118 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 IGKV1-16P04430 117 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 HSPB1P04792 205 aaKnown RBP4.97□□□□□ -1.61
TCF4-228ENST00000565393 SNRPBP14678 240 aaKnown RBP4.97□□□□□ -1.61
TCF4-228ENST00000565393 GADD45AP24522 165 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 MYL9P24844 172 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 LGALS7P47929 136 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 SERPINB10P48595 397 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 SLURP1P55000 103 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 OR10A3P58181 314 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 RUNX1Q01196 453 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 PLA2G7Q13093 441 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 FHL3Q13643 280 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 ARFRP1Q13795 201 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 IGSF11Q5DX21 431 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 PYHIN1Q6K0P9 492 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 TCTEX1D1Q8N7M0 179 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 ZNF383Q8NA42 475 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 BVESQ8NE79 360 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 OR4A4PQ8NGN8 299 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms