RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 OR9G1Q8NH87 305 aa9.04□□□□□ -0.96
SF3B3-205ENST00000564899 TMEM230Q96A57 120 aa9.04□□□□□ -0.96
SF3B3-205ENST00000564899 FAHD2AQ96GK7 314 aa9.04□□□□□ -0.96
SF3B3-205ENST00000564899 SEC22CQ9BRL7 303 aa9.04□□□□□ -0.96
SF3B3-205ENST00000564899 AGMATQ9BSE5 352 aa9.04□□□□□ -0.96
SF3B3-205ENST00000564899 C19orf24Q9BVV8 132 aa9.04□□□□□ -0.96
SF3B3-205ENST00000564899 CLEC7AQ9BXN2 247 aa9.04□□□□□ -0.96
SF3B3-205ENST00000564899 GPN1Q9HCN4 374 aaPredicted RBP9.04□□□□□ -0.96
SF3B3-205ENST00000564899 ALG5Q9Y673 324 aa9.04□□□□□ -0.96
SF3B3-205ENST00000564899 DSCAML1Q8TD84 2053 aa9.04□□□□□ -0.96
SF3B3-205ENST00000564899 YLPM1P49750 1951 aaKnown RBP9.03□□□□□ -0.96
SF3B3-205ENST00000564899 TRAV20A0A0B4J274 112 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 TEX13DA0A0J9YY54 714 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-205ENST00000564899 C7orf66A4D0T2 115 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 CRYM-AS1A6NIL9 109 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 J3QR06 171 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 HAX1O00165 279 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 TOR1AO14656 332 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 TNFSF12O43508 249 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 TOX4O94842 621 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 IFNA2P01563 188 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 IGLV2-14P01704 120 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 HLA-AP01891 365 aaKnown RBP9.03□□□□□ -0.96
SF3B3-205ENST00000564899 MMP9P14780 707 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 VAMP1P23763 118 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 UBE2MP61081 183 aaKnown RBP9.03□□□□□ -0.96
SF3B3-205ENST00000564899 RND3P61587 244 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 PPP1R1AQ13522 171 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 TMEM128Q5BJH2 165 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 C11orf88Q6PI97 169 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 SGPP2Q8IWX5 399 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 LYG1Q8N1E2 194 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 PNKDQ8N490 385 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 ZBTB34Q8NCN2 500 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 OR10X1Q8NGY0 326 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 RTN4IP1Q8WWV3 396 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-205ENST00000564899 TNFRSF14Q92956 283 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 C5orf30Q96GV9 206 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 PCGF1Q9BSM1 259 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 NAA60Q9H7X0 242 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 HEXA-AS1Q9H8Q6 139 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 UNKLQ9H9P5 680 aaKnown RBP9.03□□□□□ -0.96
SF3B3-205ENST00000564899 SDHAF2Q9NX18 166 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 PIPOXQ9P0Z9 390 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 ZNRD1Q9P1U0 126 aa9.03□□□□□ -0.96
SF3B3-205ENST00000564899 SAA2-SAA4A0A096LPE2 208 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 A0A0A6YYJ9 748 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 C9orf170A2RU37 121 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 RAB29O14966 203 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 MPPED1O15442 326 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 PGLYRP1O75594 196 aaPredicted RBP9.02□□□□□ -0.97
SF3B3-205ENST00000564899 SFT2D2O95562 160 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 SAA2P0DJI9 122 aaPredicted RBP9.02□□□□□ -0.97
SF3B3-205ENST00000564899 IGHV4-31P0DP07 118 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 IL3RAP26951 378 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 GZMKP49863 264 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 PRRX1P54821 245 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 DHODHQ02127 395 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 PAX8Q06710 450 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 CBX3Q13185 183 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 KLRD1Q13241 179 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 DHRS2Q13268 280 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 TMEM249Q2WGJ8 235 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 RPL39P5Q59GN2 51 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 DCAF12L2Q5VW00 463 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 NCR3LG1Q68D85 454 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 LYG2Q86SG7 212 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 TBC1D26Q86UD7 250 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.02□□□□□ -0.97
SF3B3-205ENST00000564899 BEND2Q8NDZ0 799 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 OR52B4Q8NGK2 314 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF596Q8TC21 504 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF431Q8TF32 576 aaPredicted RBP9.02□□□□□ -0.97
SF3B3-205ENST00000564899 CASTOR1Q8WTX7 329 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 TMEM186Q96B77 213 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 TBX15Q96SF7 602 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 GPHA2Q96T91 129 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 GHITMQ9H3K2 345 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 HIF1ANQ9NWT6 349 aa9.02□□□□□ -0.97
SF3B3-205ENST00000564899 PKD1L1Q8TDX9 2849 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 C3orf85A0A1B0GTC6 90 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 A8MV72 311 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-205ENST00000564899 SNRPGP15A8MWD9 76 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 M0R1X1 148 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 CREBL2O60519 120 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-205ENST00000564899 ARG1P05089 322 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 FAM157CP0CG43 387 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 ANXA3P12429 323 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 GATA3P23771 443 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
SF3B3-205ENST00000564899 SLC9A3R2Q15599 337 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 HLA-DRB5Q30154 266 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF626Q68DY1 528 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 HCP5Q6MZN7 132 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF66Q6ZN08 573 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 IL17RELQ6ZVW7 336 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 ODF3L1Q8IXM7 274 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 PDZD9Q8IXQ8 264 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 OR11H6Q8NGC7 330 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 OR51H1Q8NH63 302 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms