RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 A0A0U1RQV5 110 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 NPIPB13A6NJU9 1138 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 NPIPB4C9JG80 1138 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 RBFOX2O43251 390 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC00554-201ENST00000564841 LEMD1Q68G75 181 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 ATOH7Q8N100 152 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 FBXL7Q9UJT9 491 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 DNAJC13O75165 2243 aa13.81□□□□□ -0.2
LINC00554-201ENST00000564841 TRAV39A0A0B4J263 110 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 DUXBA0A1W2PPF3 345 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 IGHV3-9P01782 118 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 ZNF16P17020 682 aaPredicted RBP13.8□□□□□ -0.2
LINC00554-201ENST00000564841 HINT1P49773 126 aaPredicted RBP13.8□□□□□ -0.2
LINC00554-201ENST00000564841 RAET1LQ5VY80 246 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 MRPL14Q6P1L8 145 aaKnown RBP13.8□□□□□ -0.2
LINC00554-201ENST00000564841 KCNIP4Q6PIL6 250 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 OIT3Q8WWZ8 545 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 ANAPC16Q96DE5 110 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 REPIN1Q9BWE0 567 aaKnown RBP13.8□□□□□ -0.2
LINC00554-201ENST00000564841 CLEC18AA5D8T8 446 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 PTGDSP41222 190 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 SOX8P57073 446 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 PPP1CBP62140 327 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 MAJINQ3KP22 176 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 SLC23A3Q6PIS1 610 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 SAXO1Q8IYX7 474 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 CLEC18CQ8NCF0 446 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 GJC3Q8NFK1 279 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 OR2M3Q8NG83 312 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 PIGCQ92535 297 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 TAF15Q92804 592 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC00554-201ENST00000564841 SAMD10Q9BYL1 202 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 RYDENQ9NUL5 291 aaKnown RBP13.8□□□□□ -0.2
LINC00554-201ENST00000564841 SYNGR2O43760 224 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 IGKV1-39P01597 117 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 IGKV1D-39P04432 117 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 MSR1P21757 451 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 SRP14P37108 136 aaKnown RBP13.8□□□□□ -0.2
LINC00554-201ENST00000564841 GUCA1AP43080 201 aaPredicted RBP13.8□□□□□ -0.2
LINC00554-201ENST00000564841 LINC01551Q86U37 167 aa13.8□□□□□ -0.2
LINC00554-201ENST00000564841 LOC105371242A0A075B767 164 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 SP9P0CG40 484 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 IL11RAQ14626 422 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 SVILO95425 2214 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 NKX6-3A6NJ46 265 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 KLF7O75840 302 aaPredicted RBP13.79□□□□□ -0.2
LINC00554-201ENST00000564841 NDUFB4O95168 129 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 ATP5G3P48201 142 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 SELENOTP62341 195 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 SPACA9Q96E40 222 aaPredicted RBP13.79□□□□□ -0.2
LINC00554-201ENST00000564841 SGCZQ96LD1 299 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 WNT10AQ9GZT5 417 aa13.79□□□□□ -0.2
LINC00554-201ENST00000564841 OTOGLQ3ZCN5 2332 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 LOC102724200A0A096LPH7 203 aaPredicted RBP13.78□□□□□ -0.2
LINC00554-201ENST00000564841 SPINK4O60575 86 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 NRASP01111 189 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 IGHEP01854 428 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 SERPINE2P07093 398 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 TPPP2P59282 170 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 PCOLCEQ15113 449 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 ELOVL5Q9NYP7 299 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 LOXL2Q9Y4K0 774 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 MED13Q9UHV7 2174 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 CEP250Q9BV73 2442 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 CBY3A6NI87 242 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 NTN3O00634 580 aaPredicted RBP13.78□□□□□ -0.2
LINC00554-201ENST00000564841 CCL3P10147 92 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 MSMO1Q15800 293 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 SPATA45Q537H7 98 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 GCSAMLQ5JQS6 135 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 C9orf135Q5VTT2 229 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 VHLLQ6RSH7 139 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 Q6ZN92 141 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 TMEM144Q7Z5S9 345 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 BAGE3Q86Y29 109 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 BAGE2Q86Y30 109 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 OR5AU1Q8NGC0 362 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 CUL9Q8IWT3 2517 aa13.78□□□□□ -0.2
LINC00554-201ENST00000564841 C11orf94C9JXX5 98 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 TMEM250H0YL14 139 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 F2RP25116 425 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 LHX2P50458 406 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 RBM11P57052 281 aaKnown RBP13.77□□□□□ -0.2
LINC00554-201ENST00000564841 GNB1P62873 340 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 SERF2P84101 59 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 HIST3H3Q16695 136 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 C20orf204Q6ZNR8 217 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 OR10G9Q8NGN4 311 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 OR10G7Q8NGN6 311 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 PSMF1Q92530 271 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 TXN2Q99757 166 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 PSMG3Q9BT73 122 aaPredicted RBP13.77□□□□□ -0.2
LINC00554-201ENST00000564841 TP73-AS1Q9UF72 201 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 CACNA1DQ01668 2161 aa13.77□□□□□ -0.2
LINC00554-201ENST00000564841 SLC17A3O00476 420 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 CTSSP25774 331 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 FOLR3P41439 243 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 PSG4Q00888 419 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 NABP1Q96AH0 204 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 CRISP2P16562 243 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms