RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 DGAT2Q96PD7 388 aa4.72□□□□□ -1.65
CHD9-210ENST00000564582 OR2A5Q96R48 311 aa4.72□□□□□ -1.65
CHD9-210ENST00000564582 MRPL13Q9BYD1 178 aaKnown RBP4.72□□□□□ -1.65
CHD9-210ENST00000564582 PARP12Q9H0J9 701 aaKnown RBP4.72□□□□□ -1.65
CHD9-210ENST00000564582 SH3BGRL3Q9H299 93 aa4.72□□□□□ -1.65
CHD9-210ENST00000564582 MTIF3Q9H2K0 278 aaKnown RBP4.72□□□□□ -1.65
CHD9-210ENST00000564582 CST9LQ9H4G1 147 aa4.72□□□□□ -1.65
CHD9-210ENST00000564582 ZNF430Q9H8G1 570 aaPredicted RBP4.72□□□□□ -1.65
CHD9-210ENST00000564582 ZDHHC11Q9H8X9 412 aa4.72□□□□□ -1.65
CHD9-210ENST00000564582 PATZ1Q9HBE1 687 aaKnown RBP4.72□□□□□ -1.65
CHD9-210ENST00000564582 MRPL22Q9NWU5 206 aaKnown RBP4.72□□□□□ -1.65
CHD9-210ENST00000564582 IL36GQ9NZH8 169 aa4.72□□□□□ -1.65
CHD9-210ENST00000564582 RBM7Q9Y580 266 aaKnown RBP4.72□□□□□ -1.65
CHD9-210ENST00000564582 COL4A6Q14031 1691 aa4.72□□□□□ -1.65
CHD9-210ENST00000564582 SCN10AQ9Y5Y9 1956 aa4.72□□□□□ -1.65
CHD9-210ENST00000564582 SCN3AQ9NY46 2000 aa4.72□□□□□ -1.65
CHD9-210ENST00000564582 COL4A5P29400 1685 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 TRAV9-2A0A087WT02 112 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 IGLV5-39A0A0G2JS06 123 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 A0A1W2PRS3 328 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 DPRXA6NFQ7 191 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 FAM24AA6NFZ4 105 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 FRG2CA6NGY1 282 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 H0Y980 276 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 CORTO00230 105 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 PLPP3O14495 311 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 SOCS1O15524 211 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 PHF1O43189 567 aaPredicted RBP4.71□□□□□ -1.66
CHD9-210ENST00000564582 MLNRO43193 412 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 CD5LO43866 347 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 NTN1O95631 604 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 HLA-DQA1P01909 254 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 GYPAP02724 150 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 GPX1P07203 203 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 LINC00869P0C866 280 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 NPY1RP25929 384 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 TSPOP30536 169 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 CTRLP40313 264 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 CCR2P41597 374 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 CLDN2P57739 230 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 ZFP36L1Q07352 338 aaKnown RBP4.71□□□□□ -1.66
CHD9-210ENST00000564582 FAM53BQ14153 422 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 NFATC4Q14934 902 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 SHBQ15464 509 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 KISS1Q15726 138 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 BATFQ16520 125 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 SMIM21Q3B7S5 101 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 DEFB134Q4QY38 66 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 DCAF12Q5T6F0 453 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 RAET1LQ5VY80 246 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 CST9LP1Q5W188 147 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 STUMQ69YW2 141 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 TXNDC8Q6A555 127 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 FIGLAQ6QHK4 219 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 CLEC2AQ6UVW9 174 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 COLCA1Q6ZS62 124 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 H1FNTQ75WM6 255 aaPredicted RBP4.71□□□□□ -1.66
CHD9-210ENST00000564582 LYZL2Q7Z4W2 148 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 VN1R4Q7Z5H5 301 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 LINC00596Q86U02 117 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 VASH2Q86V25 355 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 LRP11Q86VZ4 500 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 BCORP1Q8N888 145 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 VN1R2Q8NFZ6 395 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 OR10G3Q8NGC4 313 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 OR5A1Q8NGJ0 315 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 OR4P4Q8NGL7 312 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 ZPLD1Q8TCW7 415 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 RNASE8Q8TDE3 154 aaKnown RBP4.71□□□□□ -1.66
CHD9-210ENST00000564582 C11orf40Q8WZ69 217 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 FAM3CQ92520 227 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 REEP6Q96HR9 211 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 C1orf147Q96MC9 270 aaPredicted RBP4.71□□□□□ -1.66
CHD9-210ENST00000564582 FOXN4Q96NZ1 517 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 AP1S3Q96PC3 154 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 ALKBH3Q96Q83 286 aaPredicted RBP4.71□□□□□ -1.66
CHD9-210ENST00000564582 HSPB9Q9BQS6 159 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 VN1R1Q9GZP7 353 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 AICDAQ9GZX7 198 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 MS4A6AQ9H2W1 248 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 AAMDCQ9H7C9 122 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 PNO1Q9NRX1 252 aaKnown RBP4.71□□□□□ -1.66
CHD9-210ENST00000564582 RPRMQ9NS64 109 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 MSRB1Q9NZV6 116 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 IL19Q9UHD0 177 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 PLAGL1Q9UM63 463 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 SLC17A4Q9Y2C5 497 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 OR51B2Q9Y5P1 312 aa4.71□□□□□ -1.66
CHD9-210ENST00000564582 NPIPA5A0A0B4J1W7 369 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 A0A1B0GTH9 108 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 IGSF23A1L1A6 192 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 C9JCJ5 164 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 M0R1X1 148 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 ZNF207O43670 478 aaKnown RBP4.7□□□□□ -1.66
CHD9-210ENST00000564582 CHST1O43916 411 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 DHRS3O75911 302 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 TNFP01375 233 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 PCCBP05166 539 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 SERPINE2P07093 398 aa4.7□□□□□ -1.66
CHD9-210ENST00000564582 OR5AL1P0C617 328 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms