RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 PLGRKTQ9HBL7 147 aa13.35□□□□□ -0.27
VPS9D1-203ENST00000563798 TPSG1Q9NRR2 321 aa13.35□□□□□ -0.27
VPS9D1-203ENST00000563798 FOXA2Q9Y261 457 aaPredicted RBP13.35□□□□□ -0.27
VPS9D1-203ENST00000563798 AK6Q9Y3D8 172 aaKnown RBP13.35□□□□□ -0.27
VPS9D1-203ENST00000563798 FCN1O00602 326 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 SCTP09683 121 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 CRHBPP24387 322 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 ECI1P42126 302 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 TMEM267Q0VDI3 215 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 P2RY14Q15391 338 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 RAB11BQ15907 218 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 AKIRIN2Q53H80 203 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 PYHIN1Q6K0P9 492 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 PRSS48Q7RTY5 328 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 PRR25Q96S07 402 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 PECRQ9BY49 303 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 OR1A1Q9P1Q5 309 aa13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 ZNF256Q9Y2P7 627 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-203ENST00000563798 IGKV1-6A0A0C4DH72 117 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 SPDEFO95238 335 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 GSTP1P09211 210 aaKnown RBP13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 PSMD7P51665 324 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 ZNF562Q6V9R5 426 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 GLDNQ6ZMI3 551 aaPredicted RBP13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 ZNF429Q86V71 674 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 OR56B1Q8NGI3 324 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 FAM3DQ96BQ1 224 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 ARHGAP5-AS1Q96IT6 56 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 ACOT13Q9NPJ3 140 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 RNF150Q9ULK6 438 aa13.33□□□□□ -0.28
VPS9D1-203ENST00000563798 A0A1W2PN81 502 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 H7C2Y5 167 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 HSPA12AO43301 675 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 LGALS1P09382 135 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 HSMCR30P0CW71 290 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 CHRNA7P36544 502 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 VEGFCP49767 419 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 FABP5Q01469 135 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 PSG5Q15238 335 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 ECSCRQ19T08 205 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 C2orf76Q3KRA6 126 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 PLAC9Q5JTB6 97 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 DCUN1D4Q92564 292 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 MGLLQ99685 303 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 CMSS1Q9BQ75 279 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 V9GY05 133 aa13.32□□□□□ -0.28
VPS9D1-203ENST00000563798 TRDCB7Z8K6 153 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 LINC01619G3V211 115 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 OVOL1O14753 267 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 DIRAS3O95661 229 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 CALRP27797 417 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 SERPINB10P48595 397 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 PLGLAQ15195 96 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 PPP1R27Q86WC6 154 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 PDPNQ86YL7 162 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 ZNF383Q8NA42 475 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 OR4A4PQ8NGN8 299 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 OR5B12Q96R08 314 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 TSNAXQ99598 290 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 METTL1Q9UBP6 276 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 ZNF221Q9UK13 617 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 RAB22AQ9UL26 194 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 KCNK7Q9Y2U2 307 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 U3KQK5 164 aa13.31□□□□□ -0.28
VPS9D1-203ENST00000563798 ARPC1BO15143 372 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-203ENST00000563798 DENRO43583 198 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-203ENST00000563798 IGKV1-16P04430 117 aa13.3□□□□□ -0.28
VPS9D1-203ENST00000563798 TFAP2AP05549 437 aa13.3□□□□□ -0.28
VPS9D1-203ENST00000563798 CLDN12P56749 244 aa13.3□□□□□ -0.28
VPS9D1-203ENST00000563798 DLX4Q92988 240 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-203ENST00000563798 RHOVQ96L33 236 aa13.3□□□□□ -0.28
VPS9D1-203ENST00000563798 SLA2Q9H6Q3 261 aa13.3□□□□□ -0.28
VPS9D1-203ENST00000563798 RDH8Q9NYR8 311 aa13.3□□□□□ -0.28
VPS9D1-203ENST00000563798 TRAV1-2A0A0B4J238 106 aa13.29□□□□□ -0.28
VPS9D1-203ENST00000563798 TMEM272A0A1B0GTI8 110 aa13.29□□□□□ -0.28
VPS9D1-203ENST00000563798 ERICH4A6NGS2 130 aa13.29□□□□□ -0.28
VPS9D1-203ENST00000563798 TBCEQ15813 527 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-203ENST00000563798 ACTBL2Q562R1 376 aa13.29□□□□□ -0.28
VPS9D1-203ENST00000563798 UNQ5815/PRO19632Q6UWF5 114 aa13.29□□□□□ -0.28
VPS9D1-203ENST00000563798 DRAXINQ8NBI3 349 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-203ENST00000563798 CABLES2Q9BTV7 478 aa13.29□□□□□ -0.28
VPS9D1-203ENST00000563798 ALX4Q9H161 411 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-203ENST00000563798 CA2P00918 260 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 APOA2P02652 100 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 HSPB1P04792 205 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 MAP2K4P45985 399 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 LINC00205P59089 165 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 SSX1Q16384 188 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 ACSM6Q6P461 480 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 LFNGQ8NES3 379 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 FLYWCH2Q96CP2 140 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 RAB3CQ96E17 227 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 CCDC90BQ9GZT6 254 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 SMAD5-AS1Q9Y6J3 95 aa13.28□□□□□ -0.28
VPS9D1-203ENST00000563798 IGHV4OR15-8A0A075B7B6 117 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 A0A087WW49 117 aa13.27□□□□□ -0.29
VPS9D1-203ENST00000563798 TRBV6-7A0A0A0MS04 114 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms