RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 AMY2AP04746 511 aa15.17■□□□□ 0.02
RAB40C-207ENST00000563109 IER3P46695 156 aa15.17■□□□□ 0.02
RAB40C-207ENST00000563109 ZNF846Q147U1 533 aa15.17■□□□□ 0.02
RAB40C-207ENST00000563109 ZNF57Q68EA5 555 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-207ENST00000563109 DHRS11Q6UWP2 260 aa15.17■□□□□ 0.02
RAB40C-207ENST00000563109 BORCS5Q969J3 196 aa15.17■□□□□ 0.02
RAB40C-207ENST00000563109 IGKV1D-13A0A0B4J2D9 117 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 M0R1X1 148 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 IGKV1-13P0DP09 117 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 ZNF660Q6AZW8 331 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-207ENST00000563109 DRAM1Q8N682 238 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 OR4C16Q8NGL9 310 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 OR56B4Q8NH76 319 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 MOB3AQ96BX8 217 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 MRPL20Q9BYC9 149 aaKnown RBP15.16■□□□□ 0.02
RAB40C-207ENST00000563109 SLC5A7Q9GZV3 580 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 TNFRSF19Q9NS68 423 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 SDHAF2Q9NX18 166 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 GAB2Q9UQC2 676 aa15.16■□□□□ 0.02
RAB40C-207ENST00000563109 MSMO1Q15800 293 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 SCGB2B2Q4G0G5 96 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 OR4D10Q8NGI6 311 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 CAPSLQ8WWF8 208 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 DEDD2Q8WXF8 326 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 ZNF251Q9BRH9 671 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 CCDC32Q9BV29 185 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 FXYD6Q9H0Q3 95 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 MCUBQ9NWR8 336 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 PITPNC1Q9UKF7 332 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 VPREB3Q9UKI3 123 aa15.15■□□□□ 0.02
RAB40C-207ENST00000563109 CLDN34H7C241 214 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 FAM106CPP0CH98 169 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 IL7P13232 177 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 CD40LGP29965 261 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 LSAMPQ13449 338 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 KLF9Q13886 244 aaPredicted RBP15.14■□□□□ 0.01
RAB40C-207ENST00000563109 SLC9A3R2Q15599 337 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 BAK1Q16611 211 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 FAAP20Q6NZ36 180 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 DUX5Q96PT3 197 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 SDHCQ99643 169 aaPredicted RBP15.14■□□□□ 0.01
RAB40C-207ENST00000563109 PRRT1Q99946 306 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 NABP2Q9BQ15 211 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 ESM1Q9NQ30 184 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 TCF19Q9Y242 345 aa15.14■□□□□ 0.01
RAB40C-207ENST00000563109 IGHV3-72A0A0B4J1Y9 119 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 OR5H14A6NHG9 310 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 TRIM77I1YAP6 450 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 APOA2P02652 100 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 SNRNP70P08621 437 aaKnown RBP15.13■□□□□ 0.01
RAB40C-207ENST00000563109 CD1BP29016 333 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 RAB13P51153 203 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 PPP5CP53041 499 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 HES1Q14469 280 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 LY6EQ16553 131 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 LPCAT3Q6P1A2 487 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 LIAT1Q6ZQX7 453 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 ZDHHC22Q8N966 263 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 ZBTB34Q8NCN2 500 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 CFHR4Q92496 578 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 ADTRPQ96IZ2 230 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 SCP2D1Q9UJQ7 156 aa15.13■□□□□ 0.01
RAB40C-207ENST00000563109 VENTXO95231 258 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 CT45A6P0DMU7 189 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 CT45A5P0DMU8 189 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 CT45A7P0DMV0 189 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 PGAM2P15259 253 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 S100GP29377 79 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 ECI1P42126 302 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 THBS3P49746 956 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 UBA52P62987 128 aaKnown RBP15.12■□□□□ 0.01
RAB40C-207ENST00000563109 HABP2Q14520 560 aaPredicted RBP15.12■□□□□ 0.01
RAB40C-207ENST00000563109 THNSL2Q86YJ6 484 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 DRAXINQ8NBI3 349 aaPredicted RBP15.12■□□□□ 0.01
RAB40C-207ENST00000563109 AKR1E2Q96JD6 320 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 RAB18Q9NP72 206 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 CCL28Q9NRJ3 127 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 MXRA5Q9NR99 2828 aa15.12■□□□□ 0.01
RAB40C-207ENST00000563109 IGKV1D-33P01593 117 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 IGKV1-33P01594 117 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 RNASE1P07998 156 aaKnown RBP15.11■□□□□ 0.01
RAB40C-207ENST00000563109 TMEM11P17152 192 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 CD24P25063 80 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 MC5RP33032 325 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 UCP3P55916 312 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 CBX3Q13185 183 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 GLDNQ6ZMI3 551 aaPredicted RBP15.11■□□□□ 0.01
RAB40C-207ENST00000563109 LHFPL1Q86WI0 220 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 CMTM1Q8IZ96 169 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 SLC38A6Q8IZM9 456 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 OR2T10Q8NGZ9 312 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 TERB2Q8NHR7 220 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 PIFOQ8TCI5 191 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 C5orf30Q96GV9 206 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 HSD17B10Q99714 261 aaKnown RBP15.11■□□□□ 0.01
RAB40C-207ENST00000563109 CHIAQ9BZP6 476 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 HRASLSQ9HDD0 168 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 SLC2A8Q9NY64 477 aa15.11■□□□□ 0.01
RAB40C-207ENST00000563109 A6NDX4 124 aa15.1■□□□□ 0.01
RAB40C-207ENST00000563109 FAM90A9PA6NNJ1 464 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms