RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 GAB2Q9UQC2 676 aa13.12□□□□□ -0.31
CDT1-202ENST00000562747 IGHG2P01859 326 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 OPN1MWP04001 364 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 CT45A6P0DMU7 189 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 CT45A5P0DMU8 189 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 CT45A7P0DMV0 189 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 OPN1MW2P0DN77 364 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 OPN1MW3P0DN78 364 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 MC5RP33032 325 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 GPR12P47775 334 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 RORCP51449 518 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 CNIH2Q6PI25 160 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 FAM71E2Q8N5Q1 922 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 SAMD12Q8N8I0 201 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 ACOT12Q8WYK0 555 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 CMTM3Q96MX0 182 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 RASL11BQ9BPW5 248 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 AUNIPQ9H7T9 357 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 RNF150Q9ULK6 438 aa13.11□□□□□ -0.31
CDT1-202ENST00000562747 KMT2CQ8NEZ4 4911 aaKnown RBP13.1□□□□□ -0.31
CDT1-202ENST00000562747 PROP1O75360 226 aa13.1□□□□□ -0.31
CDT1-202ENST00000562747 F2RL1P55085 397 aa13.1□□□□□ -0.31
CDT1-202ENST00000562747 ACTBP60709 375 aa13.1□□□□□ -0.31
CDT1-202ENST00000562747 CENPVQ7Z7K6 275 aaPredicted RBP13.1□□□□□ -0.31
CDT1-202ENST00000562747 H1FOOQ8IZA3 346 aaPredicted RBP13.1□□□□□ -0.31
CDT1-202ENST00000562747 OR5AU1Q8NGC0 362 aa13.1□□□□□ -0.31
CDT1-202ENST00000562747 OR5AN1Q8NGI8 311 aa13.1□□□□□ -0.31
CDT1-202ENST00000562747 OR2D2Q9H210 308 aa13.1□□□□□ -0.31
CDT1-202ENST00000562747 ANXA10Q9UJ72 324 aa13.1□□□□□ -0.31
CDT1-202ENST00000562747 H0YJW9 148 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 OR8U9P0C7N5 309 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 CD28P10747 220 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 CBX5P45973 191 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 MMDQ15546 238 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 FAM131AQ6UXB0 335 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 SLC35E3Q7Z769 313 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 FOXRED2Q8IWF2 684 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 OR8U1Q8NH10 309 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 COMMD3Q9UBI1 195 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 WASHC3Q9Y3C0 194 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 RBM7Q9Y580 266 aaKnown RBP13.09□□□□□ -0.31
CDT1-202ENST00000562747 NBEAL2Q6ZNJ1 2754 aa13.09□□□□□ -0.31
CDT1-202ENST00000562747 RBBP9O75884 186 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 APOA1P02647 267 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 TMEM69Q5SWH9 247 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 GLDNQ6ZMI3 551 aaPredicted RBP13.08□□□□□ -0.32
CDT1-202ENST00000562747 HOGA1Q86XE5 327 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 BEST4Q8NFU0 473 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 NPBQ8NG41 125 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 OR4X2Q8NGF9 303 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 CHPT1Q8WUD6 406 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 AP3S1Q92572 193 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 RBMXL1Q96E39 390 aaKnown RBP13.08□□□□□ -0.32
CDT1-202ENST00000562747 RNF5Q99942 180 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 SDHAF2Q9NX18 166 aa13.08□□□□□ -0.32
CDT1-202ENST00000562747 M0R1X1 148 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 AP4M1O00189 453 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 NBR2O15453 112 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 NDUFA3O95167 84 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 EIF4EP06730 217 aaKnown RBP13.07□□□□□ -0.32
CDT1-202ENST00000562747 SOX6P35712 828 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 RPL5P46777 297 aaKnown RBP13.07□□□□□ -0.32
CDT1-202ENST00000562747 TAS2R20P59543 309 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 CD83Q01151 205 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 MZT2AQ6P582 158 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 NDUFA11Q86Y39 141 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 GVQW1Q8N7I0 195 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 ZNF383Q8NA42 475 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 RITA1Q96K30 269 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 BCL7BQ9BQE9 202 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 KIAA1456Q9P272 454 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 OR2W1Q9Y3N9 320 aa13.07□□□□□ -0.32
CDT1-202ENST00000562747 PSMB11A5LHX3 300 aa13.06□□□□□ -0.32
CDT1-202ENST00000562747 H7C2Y5 167 aa13.06□□□□□ -0.32
CDT1-202ENST00000562747 APOA2P02652 100 aa13.06□□□□□ -0.32
CDT1-202ENST00000562747 PTHLHP12272 177 aa13.06□□□□□ -0.32
CDT1-202ENST00000562747 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
CDT1-202ENST00000562747 CNTFRP26992 372 aa13.06□□□□□ -0.32
CDT1-202ENST00000562747 ARPC4P59998 168 aa13.06□□□□□ -0.32
CDT1-202ENST00000562747 TAGLNQ01995 201 aaKnown RBP13.06□□□□□ -0.32
CDT1-202ENST00000562747 PDPNQ86YL7 162 aa13.06□□□□□ -0.32
CDT1-202ENST00000562747 CLVS1Q8IUQ0 354 aaPredicted RBP13.06□□□□□ -0.32
CDT1-202ENST00000562747 STPG2Q8N412 459 aa13.06□□□□□ -0.32
CDT1-202ENST00000562747 DRAXINQ8NBI3 349 aaPredicted RBP13.06□□□□□ -0.32
CDT1-202ENST00000562747 RAB2BQ8WUD1 216 aa13.06□□□□□ -0.32
CDT1-202ENST00000562747 CITED2Q99967 270 aaPredicted RBP13.06□□□□□ -0.32
CDT1-202ENST00000562747 SMIM31A0A1B0GVY4 71 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 SLC22A5O76082 557 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 HLA-DRB1P01911 266 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 HLA-DQB1P01920 261 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 NFYAP23511 347 aaPredicted RBP13.05□□□□□ -0.32
CDT1-202ENST00000562747 LUMP51884 338 aaPredicted RBP13.05□□□□□ -0.32
CDT1-202ENST00000562747 TMBIM6P55061 237 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 SLC35B1P78383 322 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 C5orf64Q2M2E5 130 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 OXLD1Q5BKU9 147 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 ZNF645Q8N7E2 425 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 MRAPQ8TCY5 172 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 C5orf30Q96GV9 206 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 NOL4LQ96MY1 436 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms