RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 C22orf46C9J442 243 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 M0R1X1 148 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 CDS2O95674 445 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 IGLV2-14P01704 120 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 HOXB5P09067 269 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 GIPP09681 153 aaPredicted RBP8.44□□□□□ -1.06
USP3-219ENST00000561326 USF1P22415 310 aaPredicted RBP8.44□□□□□ -1.06
USP3-219ENST00000561326 UCP1P25874 307 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 KIR2DS2P43631 304 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 KRTAP10-9P60411 292 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 ARF6P62330 175 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 TAGLNQ01995 201 aaKnown RBP8.44□□□□□ -1.06
USP3-219ENST00000561326 BTNL3Q6UXE8 466 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 TCTE3Q8IZS6 198 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 ZNF596Q8TC21 504 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 TCTEX1D2Q8WW35 142 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 IL22RA2Q969J5 263 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 TMEM186Q96B77 213 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 TMEM56Q96MV1 263 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 TP53RKQ96S44 253 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 CLEC7AQ9BXN2 247 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 CHIAQ9BZP6 476 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 COMMD9Q9P000 198 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 POLR3KQ9Y2Y1 108 aaPredicted RBP8.44□□□□□ -1.06
USP3-219ENST00000561326 TMED3Q9Y3Q3 217 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 AMMECR1Q9Y4X0 333 aaPredicted RBP8.44□□□□□ -1.06
USP3-219ENST00000561326 KPTNQ9Y664 436 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 TMEM56-RWDD3S4R434 201 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 BAHCC1Q9P281 2608 aa8.44□□□□□ -1.06
USP3-219ENST00000561326 FASNP49327 2511 aaKnown RBP8.43□□□□□ -1.06
USP3-219ENST00000561326 IGHV4-30-2A0A087WSY4 118 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 IGHV2-70DA0A0C4DH43 119 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 C13orf42A0A1B0GVH6 325 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 A0A1W2PPE3 182 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
USP3-219ENST00000561326 SLC31A2O15432 143 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 PRTN3P24158 256 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 ZFP36P26651 326 aaKnown RBP8.43□□□□□ -1.06
USP3-219ENST00000561326 THBS3P49746 956 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 FGL1Q08830 312 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 ZFP69Q49AA0 526 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 TMEM268Q5VZI3 342 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 FAM71F2Q6NXP2 309 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 PRSS57Q6UWY2 283 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 C11orf42Q8N5U0 333 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 OR5M8Q8NGP6 311 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 RBPMSQ93062 196 aaKnown RBP8.43□□□□□ -1.06
USP3-219ENST00000561326 MSI2Q96DH6 328 aaKnown RBP8.43□□□□□ -1.06
USP3-219ENST00000561326 C18orf12Q96KH6 178 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 C2orf50Q96LR7 162 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 IFI27L2Q9H2X8 130 aa8.43□□□□□ -1.06
USP3-219ENST00000561326 RANBP3Q9H6Z4 567 aaPredicted RBP8.43□□□□□ -1.06
USP3-219ENST00000561326 ASH1LQ9NR48 2969 aaKnown RBP8.42□□□□□ -1.06
USP3-219ENST00000561326 SAA2-SAA4A0A096LPE2 208 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 IGHV2-26A0A0B4J1V2 119 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 IGHV4-61A0A0C4DH41 118 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 SNAPC5O75971 98 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 SIX6O95475 246 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 SAA2P0DJI9 122 aaPredicted RBP8.42□□□□□ -1.06
USP3-219ENST00000561326 RRASP10301 218 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 VDAC1P21796 283 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 DUTP33316 252 aaKnown RBP8.42□□□□□ -1.06
USP3-219ENST00000561326 LPAR6P43657 344 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 H2BFSP57053 126 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 EIF4EBP1Q13541 118 aaPredicted RBP8.42□□□□□ -1.06
USP3-219ENST00000561326 C2orf68Q2NKX9 166 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 NCR3LG1Q68D85 454 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 LYZL2Q7Z4W2 148 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 SELENOHQ8IZQ5 122 aaKnown RBP8.42□□□□□ -1.06
USP3-219ENST00000561326 SPAG16Q8N0X2 631 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 BEND2Q8NDZ0 799 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 RNASE11Q8TAA1 199 aaKnown RBP8.42□□□□□ -1.06
USP3-219ENST00000561326 RRNAD1Q96FB5 475 aaKnown RBP8.42□□□□□ -1.06
USP3-219ENST00000561326 SEC22AQ96IW7 307 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 FYTTD1Q96QD9 318 aaKnown RBP8.42□□□□□ -1.06
USP3-219ENST00000561326 GPHA2Q96T91 129 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 SPIN2AQ99865 258 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 SPIN2BQ9BPZ2 258 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 AIFM2Q9BRQ8 373 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 NMES1Q9C002 83 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 UNKLQ9H9P5 680 aaKnown RBP8.42□□□□□ -1.06
USP3-219ENST00000561326 ZFP57Q9NU63 452 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 PRR13Q9NZ81 148 aa8.42□□□□□ -1.06
USP3-219ENST00000561326 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.41□□□□□ -1.061e-6■■■■□ 20.8
USP3-219ENST00000561326 B4DSR2 109 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 CCSO14618 274 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 RBFOX2O43251 390 aaKnown RBP eCLIP8.41□□□□□ -1.069e-6■□□□□ 10.4
USP3-219ENST00000561326 ADAP1O75689 374 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 TOX4O94842 621 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 C1QBP02746 253 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 GAPDHP04406 335 aaKnown RBP8.41□□□□□ -1.06
USP3-219ENST00000561326 EPHA1P21709 976 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 CEACAM3P40198 252 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 DVL1P1P54792 670 aaPredicted RBP8.41□□□□□ -1.06
USP3-219ENST00000561326 RPL30P62888 115 aaKnown RBP8.41□□□□□ -1.06
USP3-219ENST00000561326 PAX2Q02962 417 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 SRSF4Q08170 494 aaKnown RBP8.41□□□□□ -1.06
USP3-219ENST00000561326 RTL8BQ17RB0 113 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 RPL39P5Q59GN2 51 aa8.41□□□□□ -1.06
USP3-219ENST00000561326 DCAF12L2Q5VW00 463 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms