RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	CDX1	P47902	265 aa	Predicted RBP	13.43	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	MRPS15	P82914	257 aa	Known RBP	13.43	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	ECSCR	Q19T08	205 aa		13.43	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.43	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	C4orf3	Q8WVX3	66 aa		13.43	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	MAFIP	Q8WZ33	124 aa		13.43	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	RDH8	Q9NYR8	311 aa		13.43	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	FBXO7	Q9Y3I1	522 aa		13.43	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	TRAV41	A0A0B4J266	112 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	TRDC	B7Z8K6	153 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	MFNG	O00587	321 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	RRH	O14718	337 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	FABP7	O15540	132 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	GSTP1	P09211	210 aa	Known RBP	13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	GNB3	P16520	340 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	PPIF	P30405	207 aa	Known RBP	13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	RANBP1	P43487	201 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	LINC00205	P59089	165 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	PLGLA	Q15195	96 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	UBE2U	Q5VVX9	321 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	LIN54	Q6MZP7	749 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	SPART	Q8N0X7	666 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	OR10R2	Q8NGX6	335 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	MYOZ3	Q8TDC0	251 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	PTX4	Q96A99	478 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	MCRIP2	Q9BUT9	160 aa	Known RBP	13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	KLK15	Q9H2R5	256 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	GNB4	Q9HAV0	340 aa		13.42	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	RAB27B	O00194	218 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	MRPS14	O60783	128 aa	Known RBP	13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	PROP1	O75360	226 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	SNRPB	P14678	240 aa	Known RBP	13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	HIST1H1D	P16402	221 aa	Known RBP	13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	RAB6A	P20340	208 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	GADD45A	P24522	165 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	LUM	P51884	338 aa	Predicted RBP	13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	KIR2DS1	Q14954	304 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	IGSF11	Q5DX21	431 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	ZNF383	Q8NA42	475 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	OR5AN1	Q8NGI8	311 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	OR4A4P	Q8NGN8	299 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	ABHD5	Q8WTS1	349 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271		Q9H521	79 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	ZNF221	Q9UK13	617 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	A3GALT2	U3KPV4	340 aa		13.41	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	BET1	O15155	118 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	IGLV1-40	P01703	118 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	GAL	P22466	123 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	MC5R	P33032	325 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	TMEM65	Q6PI78	240 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	OR5B12	Q96R08	314 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	CHCHD6	Q9BRQ6	235 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	CABLES2	Q9BTV7	478 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	OR2D2	Q9H210	308 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	GHITM	Q9H3K2	345 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	TXNL4B	Q9NX01	149 aa	Known RBP	13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271	GAB2	Q9UQC2	676 aa		13.4	□□□□□ -0.26
CDC42BPB-208	ENST00000561271		A0A1W2PN81	502 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271		M0R1X1	148 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	FCN1	O00602	326 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	SOX15	O60248	233 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	RBBP9	O75884	186 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	IGKV1-16	P04430	117 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	TFAP2A	P05549	437 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	GSTT2	P0CG29	244 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	GSTT2B	P0CG30	244 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	CHRNA7	P36544	502 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	SERPINB10	P48595	397 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	FHL3	Q13643	280 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	KIAA0141	Q14154	515 aa	Predicted RBP	13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	C19orf54	Q5BKX5	351 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	OR5M8	Q8NGP6	311 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	CASTOR1	Q8WTX7	329 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	FCGR1B	Q92637	280 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	CLCC1	Q96S66	551 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	TPSG1	Q9NRR2	321 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	METTL1	Q9UBP6	276 aa	Known RBP	13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	STUB1	Q9UNE7	303 aa		13.39	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	APOA2	P02652	100 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	FGF9	P31371	208 aa	Predicted RBP	13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	GNB1	P62873	340 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	CX3CL1	P78423	397 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	ARFRP1	Q13795	201 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	PSG5	Q15238	335 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	ASPHD1	Q5U4P2	390 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	ZNF491	Q8N8L2	437 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	MINDY2	Q8NBR6	621 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	OR11H1	Q8NG94	326 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	OR10J5	Q8NHC4	309 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	C5orf30	Q96GV9	206 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	UBE2E2	Q96LR5	201 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	FAM103A1	Q9BTL3	118 aa	Known RBP	13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	TOLLIP	Q9H0E2	274 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	ATG5	Q9H1Y0	275 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	ELF5	Q9UKW6	265 aa	Predicted RBP	13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	DNAH9	Q9NYC9	4486 aa		13.38	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	TRBV6-7	A0A0A0MS04	114 aa		13.37	□□□□□ -0.27
CDC42BPB-208	ENST00000561271	METTL21EP	A6NDL7	271 aa		13.37	□□□□□ -0.27

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