RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 HSD17B10Q99714 261 aaKnown RBP8.64□□□□□ -1.03
TPM1-229ENST00000561242 RANBP3Q9H6Z4 567 aaPredicted RBP8.64□□□□□ -1.03
TPM1-229ENST00000561242 SLC35D1Q9NTN3 355 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 SCP2D1Q9UJQ7 156 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 ELF5Q9UKW6 265 aaPredicted RBP8.64□□□□□ -1.03
TPM1-229ENST00000561242 C14orf166Q9Y224 244 aaKnown RBP8.64□□□□□ -1.03
TPM1-229ENST00000561242 TACC2O95359 2948 aa8.64□□□□□ -1.03
TPM1-229ENST00000561242 TEX15Q9BXT5 2789 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 CSPG4Q6UVK1 2322 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 LY6LH3BQJ8 138 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 SHOXO15266 292 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 SLC31A2O15432 143 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 ATG12O94817 140 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 HLA-DQB1P01920 261 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 AKAIN1P0CW23 69 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 HKR1P10072 659 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 PTHLHP12272 177 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 HRH1P35367 487 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 VDAC2P45880 294 aaPredicted RBP8.63□□□□□ -1.03
TPM1-229ENST00000561242 ZNF134P52741 427 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 VMA21Q3ZAQ7 101 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 H1FOOQ8IZA3 346 aaPredicted RBP8.63□□□□□ -1.03
TPM1-229ENST00000561242 TOMM5Q8N4H5 51 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.63□□□□□ -1.03
TPM1-229ENST00000561242 CD300LFQ8TDQ1 290 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 GPX8Q8TED1 209 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 RNF5Q99942 180 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 SLIRPQ9GZT3 109 aaKnown RBP8.63□□□□□ -1.03
TPM1-229ENST00000561242 GAB2Q9UQC2 676 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 RNF114Q9Y508 228 aa8.63□□□□□ -1.03
TPM1-229ENST00000561242 CLPSL1A2RUU4 121 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 A6NDX4 124 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 CTDSPLO15194 276 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 KCNAB3O43448 404 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 SSX5O60225 188 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 CNIH1O95406 144 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 PPYP01298 95 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 PAX6P26367 422 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 LGALS7P47929 136 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 RFX2P48378 723 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 ZNF137PP52743 207 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 ERVK-16P61578 105 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 SRSF2Q01130 221 aaKnown RBP8.62□□□□□ -1.03
TPM1-229ENST00000561242 DYRK1AQ13627 763 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 KRTAP21-3Q3LHN1 58 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 RPL39P5Q59GN2 51 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 AADACL3Q5VUY0 350 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 STEAP1BQ6NZ63 245 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 ZNF66Q6ZN08 573 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 ZNF833PQ6ZTB9 187 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 KCTD9Q7L273 389 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 PDPNQ86YL7 162 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 Q8N402 240 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 CCDC71LQ8N9Z2 235 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 TMEM229BQ8NBD8 167 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 ZNF439Q8NDP4 499 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 OR52I2Q8NH67 350 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 S100ZQ8WXG8 99 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 THAP7Q9BT49 309 aaPredicted RBP8.62□□□□□ -1.03
TPM1-229ENST00000561242 MRPL20Q9BYC9 149 aaKnown RBP8.62□□□□□ -1.03
TPM1-229ENST00000561242 ESM1Q9NQ30 184 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 MTFP1Q9UDX5 166 aa8.62□□□□□ -1.03
TPM1-229ENST00000561242 ZNF107Q9UII5 783 aaPredicted RBP8.62□□□□□ -1.03
TPM1-229ENST00000561242 PIGBOS1A0A0B4J2F0 54 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 FGF16O43320 207 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 NDUFA7O95182 113 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 HRASP01112 189 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 AMY2AP04746 511 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 VSIG10L2P0DP72 767 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 AADACP22760 399 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 ZNF45Q02386 682 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 TMEM267Q0VDI3 215 aaPredicted RBP8.61□□□□□ -1.03
TPM1-229ENST00000561242 LSAMPQ13449 338 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 LIN54Q6MZP7 749 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 SLC35E3Q7Z769 313 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 SLC38A6Q8IZM9 456 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 DYNAPQ8N1N2 210 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 ARRDC1Q8N5I2 433 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 DRAXINQ8NBI3 349 aaPredicted RBP8.61□□□□□ -1.03
TPM1-229ENST00000561242 OR4S2Q8NH73 311 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 RNASE11Q8TAA1 199 aaKnown RBP8.61□□□□□ -1.03
TPM1-229ENST00000561242 VSTM2AQ8TAG5 236 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 EAF1Q96JC9 268 aaPredicted RBP8.61□□□□□ -1.03
TPM1-229ENST00000561242 PRRT1Q99946 306 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 NABP2Q9BQ15 211 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 IFI27L2Q9H2X8 130 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 SDHAF2Q9NX18 166 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 COPZ2Q9P299 210 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 KLK11Q9UBX7 282 aa8.61□□□□□ -1.03
TPM1-229ENST00000561242 RBMX2Q9Y388 322 aaKnown RBP8.61□□□□□ -1.03
TPM1-229ENST00000561242 OTOGQ6ZRI0 2925 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 IGKV1-6A0A0C4DH72 117 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 A0A1W2PPI3 338 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 TMEM89A2RUT3 159 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 GPR31O00270 319 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 MPPED1O15442 326 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 NBR2O15453 112 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 FCGR3BO75015 233 aa8.6□□□□□ -1.03
TPM1-229ENST00000561242 NAT1P18440 290 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms