RNA–Protein interactions for RNA: ENST00000560899.5

ETFA-218, Transcript of electron transfer flavoprotein subunit alpha, human

TSL 5

Gene ETFA, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ETFA-218	ENST00000560899	CT45A6	P0DMU7	189 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	CT45A5	P0DMU8	189 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	CT45A7	P0DMV0	189 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	CD28	P10747	220 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	CD83	Q01151	205 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	RPL39P5	Q59GN2	51 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	SLC35E3	Q7Z769	313 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	FOXRED2	Q8IWF2	684 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	OR5AU1	Q8NGC0	362 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	NUDCD2	Q8WVJ2	157 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	COMMD3	Q9UBI1	195 aa		13.65	□□□□□ -0.22
ETFA-218	ENST00000560899	TRAV18	A0A075B6X5	111 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	SH2D7	A6NKC9	451 aa	Predicted RBP	13.64	□□□□□ -0.23
ETFA-218	ENST00000560899		H0YJW9	148 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	SSX5	O60225	188 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	PROP1	O75360	226 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	NDUFA3	O95167	84 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	OPN1MW	P04001	364 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	OPN1MW2	P0DN77	364 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	OPN1MW3	P0DN78	364 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	GPR12	P47775	334 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	ACTB	P60709	375 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	MMD	Q15546	238 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	C9orf152	Q5JTZ5	239 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	NPB	Q8NG41	125 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	OR4X2	Q8NGF9	303 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	MAFIP	Q8WZ33	124 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	RNF5	Q99942	180 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	RASL11B	Q9BPW5	248 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	GINS4	Q9BRT9	223 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	CCDC59	Q9P031	241 aa	Known RBP	13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	WASHC3	Q9Y3C0	194 aa		13.64	□□□□□ -0.23
ETFA-218	ENST00000560899	IGKV1D-8	A0A087WSZ0	117 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	ADARB2-AS1	A8MUL3	147 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	ZNF701	M0R085	212 aa	Predicted RBP	13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	AP4M1	O00189	453 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	NBR2	O15453	112 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	F2RL1	P55085	397 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	CNIH2	Q6PI25	160 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	FAM131A	Q6UXB0	335 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	COMMD1	Q8N668	190 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	C11orf44	Q8N8P7	122 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	DYNC2LI1	Q8TCX1	351 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	CITED2	Q99967	270 aa	Predicted RBP	13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	GON7	Q9BXV9	100 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	AUNIP	Q9H7T9	357 aa		13.63	□□□□□ -0.23
ETFA-218	ENST00000560899	SMIM31	A0A1B0GVY4	71 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	PSMB11	A5LHX3	300 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	CCDC160	A6NGH7	325 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	HLA-DRB1	P01911	266 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	TAGLN	Q01995	201 aa	Known RBP	13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	TCTEX1D4	Q5JR98	221 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	TMEM69	Q5SWH9	247 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	PDPN	Q86YL7	162 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	STPG2	Q8N412	459 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	ST6GALNAC5	Q9BVH7	336 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	RBM38	Q9H0Z9	239 aa	Known RBP	13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	OR2D2	Q9H210	308 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	ANXA10	Q9UJ72	324 aa		13.62	□□□□□ -0.23
ETFA-218	ENST00000560899	SPDEF	O95238	335 aa		13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	IGF1	P05019	195 aa		13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	OR8U9	P0C7N5	309 aa		13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	CBX5	P45973	191 aa		13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	SLC35B1	P78383	322 aa		13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	C5orf64	Q2M2E5	130 aa		13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	OR8U1	Q8NH10	309 aa		13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	SDHAF2	Q9NX18	166 aa		13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	KIAA1456	Q9P272	454 aa		13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	RSL24D1	Q9UHA3	163 aa	Known RBP	13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.61	□□□□□ -0.23
ETFA-218	ENST00000560899	HPGDS	O60760	199 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	SLC22A5	O76082	557 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	APOA2	P02652	100 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	EIF4E	P06730	217 aa	Known RBP	13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	HOGA1	Q86XE5	327 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	ZNF383	Q8NA42	475 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	BEST4	Q8NFU0	473 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	OR4F17	Q8NGA8	305 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	OR4F4	Q96R69	305 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	HSPB9	Q9BQS6	159 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	NDUFA13	Q9P0J0	144 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	ZNF107	Q9UII5	783 aa	Predicted RBP	13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	RNF150	Q9ULK6	438 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899	OR2W1	Q9Y3N9	320 aa		13.6	□□□□□ -0.23
ETFA-218	ENST00000560899		M0R1X1	148 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	RRH	O14718	337 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	TUSC2	O75896	110 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	ELK1	P19419	428 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	SLC6A1	P30531	599 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	TAS2R20	P59543	309 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	ADTRP	Q96IZ2	230 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	RITA1	Q96K30	269 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	NOL4L	Q96MY1	436 aa	Predicted RBP	13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	ADAM30	Q9UKF2	790 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	ANAPC10	Q9UM13	185 aa		13.59	□□□□□ -0.23
ETFA-218	ENST00000560899	CMYA5	Q8N3K9	4069 aa		13.58	□□□□□ -0.24
ETFA-218	ENST00000560899	TCRBV4S1A1T	A0A5B7	111 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms