RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PIMREGQ9BSJ6 248 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 FAM212BQ9NTI7 297 aaPredicted RBP9.23□□□□□ -0.93
SNX1-212ENST00000560861 BEX4Q9NWD9 120 aaPredicted RBP9.23□□□□□ -0.93
SNX1-212ENST00000560861 KCNS2Q9ULS6 477 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 KCNIP3Q9Y2W7 256 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 POLR3KQ9Y2Y1 108 aaPredicted RBP9.23□□□□□ -0.93
SNX1-212ENST00000560861 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.22□□□□□ -0.931e-9■■■■□ 24.4
SNX1-212ENST00000560861 LOC105371242A0A075B767 164 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 IGHV4-30-2A0A087WSY4 118 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 IGHV4-61A0A0C4DH41 118 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 A0A1W2PPE3 182 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 LINC00473A8K010 186 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 SMLR1H3BR10 107 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 M0R1W7 72 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 IGKV1-39P01597 117 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 IGKV1D-39P04432 117 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 DUTP33316 252 aaKnown RBP9.22□□□□□ -0.93
SNX1-212ENST00000560861 GPR12P47775 334 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 ZNF137PP52743 207 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 DSCR9P59020 149 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 RAP2BP61225 183 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 SRPXP78539 464 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 RPL39P5Q59GN2 51 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 CLEC2AQ6UVW9 174 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 SELENOHQ8IZQ5 122 aaKnown RBP9.22□□□□□ -0.93
SNX1-212ENST00000560861 LGI3Q8N145 548 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 LRRC75A-AS1Q8N1F1 130 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 KIR3DL3Q8N743 410 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 UXS1Q8NBZ7 420 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 DDB2Q92466 427 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 PERPQ96FX8 193 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 TMEM133Q9H2Q1 129 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 ZNRD1Q9P1U0 126 aa9.22□□□□□ -0.93
SNX1-212ENST00000560861 RBM7Q9Y580 266 aaKnown RBP9.22□□□□□ -0.93
SNX1-212ENST00000560861 CREBBPQ92793 2442 aa9.21□□□□□ -0.93
SNX1-212ENST00000560861 SAA2-SAA4A0A096LPE2 208 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 DUXBA0A1W2PPF3 345 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 A0A1W2PPH5 198 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 RNF212BA8MTL3 300 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 MPTX1A8MV57 137 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 FAM157AC9JC47 383 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 J3QR06 171 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 C1QBP02746 253 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 HNRNPCP07910 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNX1-212ENST00000560861 SAA2P0DJI9 122 aaPredicted RBP9.21□□□□□ -0.94
SNX1-212ENST00000560861 S100GP29377 79 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 GZMKP49863 264 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 GNG10P50151 68 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 Q5BKY6 102 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 NMSQ5H8A3 153 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 GGNBP1Q5YKI7 109 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 HCP5Q6MZN7 132 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 BTNL3Q6UXE8 466 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 C1orf122Q6ZSJ8 110 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 ZNF833PQ6ZTB9 187 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 LURAP1LQ8IV03 231 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 TCTEX1D1Q8N7M0 179 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 OR51H1Q8NH63 302 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 OR9G1Q8NH87 305 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 TNFRSF14Q92956 283 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 ST6GALNAC6Q969X2 333 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 RAB39BQ96DA2 213 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 MBD6Q96DN6 1003 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 OR10C1Q96KK4 312 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 HSD17B10Q99714 261 aaKnown RBP9.21□□□□□ -0.94
SNX1-212ENST00000560861 CHIAQ9BZP6 476 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 SIRPDQ9H106 197 aa9.21□□□□□ -0.94
SNX1-212ENST00000560861 UNKLQ9H9P5 680 aaKnown RBP9.21□□□□□ -0.94
SNX1-212ENST00000560861 LIN7CQ9NUP9 197 aaKnown RBP9.21□□□□□ -0.94
SNX1-212ENST00000560861 AKAP9Q99996 3911 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 TRAV14DV4A0A0A6YYC5 116 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 RAB29O14966 203 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 ENSAO43768 121 aaKnown RBP9.2□□□□□ -0.94
SNX1-212ENST00000560861 IGLV1-47P01700 117 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 HOXB5P09067 269 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 P0C879 139 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 LINC00205P59089 165 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 DEFB113Q30KQ7 82 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 TMEM268Q5VZI3 342 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 NCR3LG1Q68D85 454 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 LYZL2Q7Z4W2 148 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 SLC35G3Q8N808 338 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 OR11H4Q8NGC9 324 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 OR2T35Q8NGX2 323 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 C1orf159Q96HA4 380 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 C2orf50Q96LR7 162 aa9.2□□□□□ -0.94
SNX1-212ENST00000560861 PRRC2AP48634 2157 aaKnown RBP9.2□□□□□ -0.94
SNX1-212ENST00000560861 IGHV2-26A0A0B4J1V2 119 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 A0A0G2JRQ6 117 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 M0R1X1 148 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 RBFOX2O43251 390 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNX1-212ENST00000560861 FOXH1O75593 365 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 IGKV1-5P01602 117 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 MMP9P14780 707 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 SLC25A16P16260 332 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 PRTN3P24158 256 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 DLX1P56177 255 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 CATR1Q13166 79 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms