RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 LOC100506127A0A0U1RQW1 187 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 NBR2O15453 112 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 RBBP9O75884 186 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 IGHG4P01861 327 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 CNTFRP26992 372 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 PPIFP30405 207 aaKnown RBP10.38□□□□□ -0.75
SMAD3-213ENST00000560175 SLC6A1P30531 599 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 MRPS15P82914 257 aaKnown RBP10.38□□□□□ -0.75
SMAD3-213ENST00000560175 DEFA6Q01524 100 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 MXD1Q05195 221 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 PNLIPRP3Q17RR3 467 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 C5orf64Q2M2E5 130 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 OR5H6Q8NGV6 325 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 SLC25A38Q96DW6 304 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 GON7Q9BXV9 100 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 RHBDL2Q9NX52 303 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 ZNF107Q9UII5 783 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-213ENST00000560175 LINC00527Q9UJ94 153 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 SPATA2Q9UM82 520 aa10.38□□□□□ -0.75
SMAD3-213ENST00000560175 A0A075B6Q4 140 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 IGHV7-81A0A0B4J1V7 117 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 SSX5O60225 188 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 RPS19P39019 145 aaKnown RBP10.37□□□□□ -0.75
SMAD3-213ENST00000560175 CRIP2P52943 208 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-213ENST00000560175 RPL23AP62750 156 aaKnown RBP10.37□□□□□ -0.75
SMAD3-213ENST00000560175 SLC35B1P78383 322 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 ARFRP1Q13795 201 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 MMDQ15546 238 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 BEAN1Q3B7T3 259 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 TEX38Q6PEX7 206 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 FAM131AQ6UXB0 335 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 CROCCP3Q8IVE0 287 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 H1FOOQ8IZA3 346 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-213ENST00000560175 ZNF383Q8NA42 475 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 OR10J5Q8NHC4 309 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 ZNF221Q9UK13 617 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 RNF150Q9ULK6 438 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 WASHC3Q9Y3C0 194 aa10.37□□□□□ -0.75
SMAD3-213ENST00000560175 RRHO14718 337 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 AIREO43918 545 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 TFAP2AP05549 437 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 ELANEP08246 267 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 CTXN2P0C2S0 81 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 PSMB8P28062 276 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 TALDO1P37837 337 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 LINC00205P59089 165 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 FOXE3Q13461 319 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 C19orf54Q5BKX5 351 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 IDNKQ5T6J7 187 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 LIN54Q6MZP7 749 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 GLDNQ6ZMI3 551 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-213ENST00000560175 MYOZ3Q8TDC0 251 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 MAFIPQ8WZ33 124 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 OR51J1Q9H342 316 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 VCX3AQ9NNX9 186 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 SDHAF2Q9NX18 166 aa10.36□□□□□ -0.75
SMAD3-213ENST00000560175 TMEM235A6NFC5 223 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 G3V4G9 280 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 BET1O15155 118 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 RRP9O43818 475 aaKnown RBP10.35□□□□□ -0.75
SMAD3-213ENST00000560175 IGLV1-40P01703 118 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 IGKV1-16P04430 117 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 OR8U9P0C7N5 309 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 OR5H8P0DN80 308 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 TGFBR1P36897 503 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 CDX1P47902 265 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-213ENST00000560175 TAGLNQ01995 201 aaKnown RBP10.35□□□□□ -0.75
SMAD3-213ENST00000560175 PDLIM3Q53GG5 364 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-213ENST00000560175 ZNF660Q6AZW8 331 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-213ENST00000560175 CNIH2Q6PI25 160 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 ETV3LQ6ZN32 361 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 PDPNQ86YL7 162 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 OR13F1Q8NGS4 319 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 OR8U1Q8NH10 309 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 C5orf30Q96GV9 206 aa10.35□□□□□ -0.75
SMAD3-213ENST00000560175 TNCP24821 2201 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 A0A1W2PRX2 142 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 FCN1O00602 326 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 HLA-DQB1P01920 261 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 EGR2P11161 476 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-213ENST00000560175 THBS3P49746 956 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 KIAA0141Q14154 515 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-213ENST00000560175 DRAXINQ8NBI3 349 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-213ENST00000560175 MINDY2Q8NBR6 621 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 NUDCD2Q8WVJ2 157 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 DDB2Q92466 427 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 P2RX4Q99571 388 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 ST6GALNAC5Q9BVH7 336 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 FUNDC2Q9BWH2 189 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 OR2D2Q9H210 308 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 KIAA1456Q9P272 454 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 NUBP2Q9Y5Y2 271 aa10.34□□□□□ -0.75
SMAD3-213ENST00000560175 TRAV18A0A075B6X5 111 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 XRCC3O43542 346 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 TUSC2O75896 110 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 SPDEFO95238 335 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 IGLV2-14P01704 120 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 IGLV2-23P01705 113 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 RPLP1P05386 114 aaKnown RBP10.33□□□□□ -0.76
SMAD3-213ENST00000560175 CRYGBP07316 175 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms