RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 ZNF880Q6PDB4 577 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 UNQ5815/PRO19632Q6UWF5 114 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 MINDY2Q8NBR6 621 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 RITA1Q96K30 269 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 OR4C12Q96R67 309 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 ELOVL1Q9BW60 279 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 C11orf54Q9H0W9 315 aaPredicted RBP9.8□□□□□ -0.84
SNX1-209ENST00000559961 LPAR5Q9H1C0 372 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 KLK15Q9H2R5 256 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 SLA2Q9H6Q3 261 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 GNB4Q9HAV0 340 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 RAB22AQ9UL26 194 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 U3KQK5 164 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 V9GY05 133 aa9.8□□□□□ -0.84
SNX1-209ENST00000559961 TRDCB7Z8K6 153 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 H0YJW9 148 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 I3L521 148 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 SOCS1O15524 211 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 SPDEFO95238 335 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 TFAP2AP05549 437 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 TALDO1P37837 337 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 HSPA13P48723 471 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 PITPNAQ00169 270 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 TAGLNQ01995 201 aaKnown RBP9.79□□□□□ -0.84
SNX1-209ENST00000559961 MLLT11Q13015 90 aaPredicted RBP9.79□□□□□ -0.84
SNX1-209ENST00000559961 AKIRIN2Q53H80 203 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 ZNF562Q6V9R5 426 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 GLDNQ6ZMI3 551 aaPredicted RBP9.79□□□□□ -0.84
SNX1-209ENST00000559961 C5orf24Q7Z6I8 188 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 FAM89BQ8N5H3 189 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 OR6Q1Q8NGQ2 317 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 OR10J5Q8NHC4 309 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 FAM3DQ96BQ1 224 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 Q9N2K0 584 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 LSM2Q9Y333 95 aaKnown RBP9.79□□□□□ -0.84
SNX1-209ENST00000559961 SMAD5-AS1Q9Y6J3 95 aa9.79□□□□□ -0.84
SNX1-209ENST00000559961 C13orf42A0A1B0GVH6 325 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 METTL21EPA6NDL7 271 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 LGALS1P09382 135 aaKnown RBP9.78□□□□□ -0.84
SNX1-209ENST00000559961 MYL9P24844 172 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 TPPP2P59282 170 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 QRFPP83859 136 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 PSG5Q15238 335 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 C2orf76Q3KRA6 126 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 PRSS48Q7RTY5 328 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 PDPNQ86YL7 162 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.78□□□□□ -0.84
SNX1-209ENST00000559961 OR5AN1Q8NGI8 311 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 OR4A4PQ8NGN8 299 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 MYOZ3Q8TDC0 251 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 DCUN1D4Q92564 292 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 PTX4Q96A99 478 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 RAB3CQ96E17 227 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 ARHGAP5-AS1Q96IT6 56 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 MGLLQ99685 303 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 GINS4Q9BRT9 223 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 PECRQ9BY49 303 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 KCNK15Q9H427 330 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 SCOCQ9UIL1 159 aa9.78□□□□□ -0.84
SNX1-209ENST00000559961 A0A0G2JLM5 398 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 M0R1X1 148 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 BET1O15155 118 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 TRGV3P03979 118 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 HSPB1P04792 205 aaKnown RBP9.77□□□□□ -0.85
SNX1-209ENST00000559961 SCTP09683 121 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 OR8U9P0C7N5 309 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 CD37P11049 281 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 LGALS7P47929 136 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 AQP4P55087 323 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 RPS25P62851 125 aaKnown RBP9.77□□□□□ -0.85
SNX1-209ENST00000559961 GNB1P62873 340 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 IRF3Q14653 427 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 FXYD3Q14802 87 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 ARL6IP1Q15041 203 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 TATDN3Q17R31 274 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 RTL8BQ17RB0 113 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 CD200R1LQ6Q8B3 271 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 DRAXINQ8NBI3 349 aaPredicted RBP9.77□□□□□ -0.85
SNX1-209ENST00000559961 LFNGQ8NES3 379 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 ARPC1AQ92747 370 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 RBMXL1Q96E39 390 aaKnown RBP9.77□□□□□ -0.85
SNX1-209ENST00000559961 TMEM68Q96MH6 324 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 MS4A10Q96PG2 267 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 HDHD3Q9BSH5 251 aaPredicted RBP9.77□□□□□ -0.85
SNX1-209ENST00000559961 TOLLIPQ9H0E2 274 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 DUSP21Q9H596 190 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 SLC35D1Q9NTN3 355 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 RDH8Q9NYR8 311 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 OR1A1Q9P1Q5 309 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 LSM4Q9Y4Z0 139 aaKnown RBP9.77□□□□□ -0.85
SNX1-209ENST00000559961 NUBP2Q9Y5Y2 271 aa9.77□□□□□ -0.85
SNX1-209ENST00000559961 A0A075B6Q4 140 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 A0A0A6YYD4 124 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 ANKRD65E5RJM6 399 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 FCN1O00602 326 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 FABP7O15540 132 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 CA2P00918 260 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 RRASP10301 218 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 CRIP2P52943 208 aaPredicted RBP9.76□□□□□ -0.85
SNX1-209ENST00000559961 CLDN12P56749 244 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms