RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 IGKV1-16P04430 117 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 GNB3P16520 340 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 SLC6A1P30531 599 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 CX3CL1P78423 397 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 IGSF11Q5DX21 431 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 MOB1BQ7L9L4 216 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 ZNF367Q7RTV3 350 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 MINDY2Q8NBR6 621 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 GON7Q9BXV9 100 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 C12orf4Q9NQ89 552 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 ZNF230Q9UIE0 474 aaPredicted RBP13.77□□□□□ -0.21
HDDC3-205ENST00000559898 ZNF580Q9UK33 172 aa13.77□□□□□ -0.21
HDDC3-205ENST00000559898 IGKV1D-8A0A087WSZ0 117 aa13.76□□□□□ -0.21
HDDC3-205ENST00000559898 GSTT2P0CG29 244 aa13.76□□□□□ -0.21
HDDC3-205ENST00000559898 GSTT2BP0CG30 244 aa13.76□□□□□ -0.21
HDDC3-205ENST00000559898 PSMA1P25786 263 aaKnown RBP13.76□□□□□ -0.21
HDDC3-205ENST00000559898 FAM71F2Q6NXP2 309 aa13.76□□□□□ -0.21
HDDC3-205ENST00000559898 OR5AN1Q8NGI8 311 aa13.76□□□□□ -0.21
HDDC3-205ENST00000559898 RIMS4Q9H426 269 aaPredicted RBP13.76□□□□□ -0.21
HDDC3-205ENST00000559898 NDUFB11Q9NX14 153 aa13.76□□□□□ -0.21
HDDC3-205ENST00000559898 RDH8Q9NYR8 311 aa13.76□□□□□ -0.21
HDDC3-205ENST00000559898 A0A075B6Q4 140 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 A0A1W2PN81 502 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 TRDCB7Z8K6 153 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 H7C2Y5 167 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 ITGB1BP1O14713 200 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 HSPA12AO43301 675 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 ZBTB25P24278 435 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 CHRNA7P36544 502 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 RAB9AP51151 201 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 SSBP2P81877 361 aaPredicted RBP13.75□□□□□ -0.21
HDDC3-205ENST00000559898 PSG5Q15238 335 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 C22orf42Q6IC83 251 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 CD200R1LQ6Q8B3 271 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 OR56B1Q8NGI3 324 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 PTX4Q96A99 478 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 MCRIP2Q9BUT9 160 aaKnown RBP13.75□□□□□ -0.21
HDDC3-205ENST00000559898 KIAA1456Q9P272 454 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 RAB22AQ9UL26 194 aa13.75□□□□□ -0.21
HDDC3-205ENST00000559898 OR5H14A6NHG9 310 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 IFITM5A6NNB3 132 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 SEC14L6B5MCN3 397 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 RAB27BO00194 218 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 MFNGO00587 321 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 ARPC1BO15143 372 aaKnown RBP13.74□□□□□ -0.21
HDDC3-205ENST00000559898 FCGR3AP08637 254 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 DGCR2P98153 550 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 OR5M8Q8NGP6 311 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 OR1N2Q8NGR9 330 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 DPF1Q92782 380 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 UBE2E2Q96LR5 201 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 WASHC3Q9Y3C0 194 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 NUBP2Q9Y5Y2 271 aa13.74□□□□□ -0.21
HDDC3-205ENST00000559898 TRAV1-2A0A0B4J238 106 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 TRDV1A0A1B0GX56 115 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 BET1O15155 118 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 ATP6V1G2O95670 118 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 CA2P00918 260 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 GSTP1P09211 210 aaKnown RBP13.73□□□□□ -0.21
HDDC3-205ENST00000559898 CRIP2P52943 208 aaPredicted RBP13.73□□□□□ -0.21
HDDC3-205ENST00000559898 SLURP1P55000 103 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 PJVKQ0ZLH3 352 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 ZNF260Q3ZCT1 412 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 TMEM65Q6PI78 240 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 OR10R2Q8NGX6 335 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 DCUN1D4Q92564 292 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 RAB3CQ96E17 227 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 MS4A10Q96PG2 267 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 METTL1Q9UBP6 276 aaKnown RBP13.73□□□□□ -0.21
HDDC3-205ENST00000559898 RAB26Q9ULW5 256 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 VSIG4Q9Y279 399 aa13.73□□□□□ -0.21
HDDC3-205ENST00000559898 M0R1X1 148 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 FABP7O15540 132 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 IGLV2-23P01705 113 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 IGHV3-11P01762 117 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 OR8U9P0C7N5 309 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 OR5H8P0DN80 308 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 ECI1P42126 302 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 DEFA5Q01523 94 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 PLGLAQ15195 96 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 ZNF660Q6AZW8 331 aaPredicted RBP13.72□□□□□ -0.21
HDDC3-205ENST00000559898 SPARTQ8N0X7 666 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 LFNGQ8NES3 379 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 ABHD5Q8WTS1 349 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 B9D2Q9BPU9 175 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 GPR61Q9BZJ8 451 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 VCX3BQ9H321 246 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 SDHAF2Q9NX18 166 aa13.72□□□□□ -0.21
HDDC3-205ENST00000559898 LSM4Q9Y4Z0 139 aaKnown RBP13.72□□□□□ -0.21
HDDC3-205ENST00000559898 IGHV4OR15-8A0A075B7B6 117 aa13.71□□□□□ -0.21
HDDC3-205ENST00000559898 A0A087WW49 117 aa13.71□□□□□ -0.21
HDDC3-205ENST00000559898 RAB3BP20337 219 aa13.71□□□□□ -0.21
HDDC3-205ENST00000559898 MC5RP33032 325 aa13.71□□□□□ -0.21
HDDC3-205ENST00000559898 HSPA13P48723 471 aa13.71□□□□□ -0.21
HDDC3-205ENST00000559898 RPS16P62249 146 aaKnown RBP13.71□□□□□ -0.21
HDDC3-205ENST00000559898 RUNX1Q01196 453 aa13.71□□□□□ -0.21
HDDC3-205ENST00000559898 MRGPRG-AS1Q2M3A8 158 aa13.71□□□□□ -0.21
HDDC3-205ENST00000559898 C9orf66Q5T8R8 295 aa13.71□□□□□ -0.21
HDDC3-205ENST00000559898 PPP1R27Q86WC6 154 aa13.71□□□□□ -0.21
HDDC3-205ENST00000559898 EDARADDQ8WWZ3 215 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms