RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 BTNL3Q6UXE8 466 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 HEPN1Q6WQI6 88 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 SLC7A5P1Q8MH63 180 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.45□□□□□ -0.74
USP3-213ENST00000559711 ABHD14AQ9BUJ0 271 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 C11orf1Q9H5F2 150 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 A6NNC1 897 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 LINC00473A8K010 186 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 C17orf98A8MV24 154 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 SLC31A2O15432 143 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 RAMP3O60896 148 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 RPL12P30050 165 aaKnown RBP10.44□□□□□ -0.74
USP3-213ENST00000559711 CXorf66Q5JRM2 361 aaPredicted RBP10.44□□□□□ -0.74
USP3-213ENST00000559711 Q6ZRM9 215 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 SPAG16Q8N0X2 631 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 DMBX1Q8NFW5 382 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 CD300LFQ8TDQ1 290 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 TCTEX1D2Q8WW35 142 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 ZNF714Q96N38 554 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 RCL1Q9Y2P8 373 aaKnown RBP10.44□□□□□ -0.74
USP3-213ENST00000559711 ZFYVE26Q68DK2 2539 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 HRNRQ86YZ3 2850 aaPredicted RBP10.44□□□□□ -0.74
USP3-213ENST00000559711 TRBV23-1A0A0A0MS06 115 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 KIAA1324LA8MWY0 1029 aaPredicted RBP10.44□□□□□ -0.74
USP3-213ENST00000559711 F5H0A9 414 aaPredicted RBP10.44□□□□□ -0.74
USP3-213ENST00000559711 GPR37O15354 613 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 GOSR1O95249 250 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 IGHV3-7P01780 117 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 P0C879 139 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 NFYBP25208 207 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 P2RY1P47900 373 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 DLX6P56179 175 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 PRAMEF5Q5TYX0 476 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 GPR157Q5UAW9 335 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 NCR3LG1Q68D85 454 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 ZNF841Q6ZN19 808 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 SLC25A48Q6ZT89 311 aaKnown RBP10.44□□□□□ -0.74
USP3-213ENST00000559711 OR8H3Q8N146 312 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 ST8SIA2Q92186 375 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 H1FXQ92522 213 aaKnown RBP10.44□□□□□ -0.74
USP3-213ENST00000559711 LEAP2Q969E1 77 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 GSX2Q9BZM3 304 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 CYTL1Q9NRR1 136 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 LAMP3Q9UQV4 416 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 MMP24Q9Y5R2 645 aa10.44□□□□□ -0.74
USP3-213ENST00000559711 TANC2Q9HCD6 1990 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 TAAR5O14804 337 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 RAB29O14966 203 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 ATG12O94817 140 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 PRB1P04280 392 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 MMP9P14780 707 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 DAOP14920 347 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 CCL3L1P16619 93 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 AKR1C2P52895 323 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 LINC00205P59089 165 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 TMEM155Q4W5P6 130 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 C1orf229Q6ZS94 237 aaPredicted RBP10.43□□□□□ -0.74
USP3-213ENST00000559711 ODF3L1Q8IXM7 274 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 STOML3Q8TAV4 291 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 SCARB1Q8WTV0 552 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 ZNF251Q9BRH9 671 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 ZNF471Q9BX82 626 aaPredicted RBP10.43□□□□□ -0.74
USP3-213ENST00000559711 COA4Q9NYJ1 87 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 RALYQ9UKM9 306 aaKnown RBP10.43□□□□□ -0.74
USP3-213ENST00000559711 EPG5Q9HCE0 2579 aa10.43□□□□□ -0.74
USP3-213ENST00000559711 ARID1AO14497 2285 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 LRBAP50851 2863 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 RPS10-NUDT3A0A1W2PQS6 291 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 M0R1X1 148 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.749e-6■□□□□ 10.4
USP3-213ENST00000559711 S1PR2O95136 353 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 SPDEFO95238 335 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 TMEM33P57088 247 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 POLR2GP62487 172 aaKnown RBP eCLIP10.42□□□□□ -0.74
USP3-213ENST00000559711 RPL39P5Q59GN2 51 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 CLLU1Q5K131 121 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 ZNF843Q8N446 348 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 RNASE11Q8TAA1 199 aaKnown RBP10.42□□□□□ -0.74
USP3-213ENST00000559711 RAB1CQ92928 201 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 PHYHIPLQ96FC7 376 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 CACNG5Q9UF02 275 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 MIOXQ9UGB7 285 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 RAI1Q7Z5J4 1906 aaPredicted RBP10.42□□□□□ -0.74
USP3-213ENST00000559711 DOPEY1Q5JWR5 2465 aa10.42□□□□□ -0.74
USP3-213ENST00000559711 A0A1W2PPE3 182 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 GPR137BO60478 399 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 LY6HO94772 140 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 PVALBP20472 110 aaPredicted RBP10.41□□□□□ -0.74
USP3-213ENST00000559711 EPHA1P21709 976 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 ZNF816Q0VGE8 651 aaPredicted RBP10.41□□□□□ -0.74
USP3-213ENST00000559711 IZUMO4Q1ZYL8 232 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 OR2B11Q5JQS5 317 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 ALKAL2Q6UX46 152 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 C8orf31Q8N9H6 132 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 DDB2Q92466 427 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 RAB39BQ96DA2 213 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 TIMD4Q96H15 378 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 CHODLQ9H9P2 273 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 UBTD1Q9HAC8 227 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 FLNCQ14315 2725 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms