RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TLE1Q04724 770 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 TMEM164Q5U3C3 297 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 SMIM7Q9BQ49 75 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 SLC25A22Q9H936 323 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 KCNIP1Q9NZI2 227 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 NAT8Q9UHE5 227 aa13.92□□□□□ -0.18
SPG11-215ENST00000559193 PMS2P5A8MQ11 134 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 WNT9BO14905 357 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 TGOLN2O43493 480 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 RAC2P15153 192 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 MDKP21741 143 aaPredicted RBP13.91□□□□□ -0.18
SPG11-215ENST00000559193 MRPL49Q13405 166 aaKnown RBP13.91□□□□□ -0.18
SPG11-215ENST00000559193 GABRA6Q16445 453 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 CYP2G1PQ6ZSU1 146 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 ZBTB34Q8NCN2 500 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 GALMQ96C23 342 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 FRYQ5TBA9 3013 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 TRGV5A0A0B4J1U4 118 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 LRRC30A6NM36 301 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 ZNF729A6NN14 1252 aaPredicted RBP13.91□□□□□ -0.18
SPG11-215ENST00000559193 PTBP3O95758 552 aaKnown RBP13.91□□□□□ -0.18
SPG11-215ENST00000559193 IGHV1-2P23083 117 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 MPV17P39210 176 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 MSMO1Q15800 293 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 ADIRFQ15847 76 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 C9orf152Q5JTZ5 239 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 NCR3LG1Q68D85 454 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 TMEM147Q9BVK8 224 aa13.91□□□□□ -0.18
SPG11-215ENST00000559193 LNP1A1A4G5 178 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 C17orf98A8MV24 154 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 HBZP02008 142 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 ZNF826PQ6ZT77 177 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 CXorf67Q86X51 503 aaPredicted RBP13.9□□□□□ -0.18
SPG11-215ENST00000559193 OR5H1A6NKK0 313 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 TMEM210A6NLX4 147 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 C1QTNF9BB2RNN3 333 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 KBTBD11O94819 623 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 TFF1P04155 84 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 IL2RGP31785 369 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 UBE2NP61088 152 aaKnown RBP13.9□□□□□ -0.18
SPG11-215ENST00000559193 AESQ08117 197 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 C16orf82Q7Z2V1 217 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 ZDHHC16Q969W1 377 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 COQ2Q96H96 371 aa13.9□□□□□ -0.18
SPG11-215ENST00000559193 CTXND1A0A1B0GTU2 59 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 MLNRO43193 412 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 ZG16O60844 167 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 LYZL6O75951 148 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 CD46P15529 392 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 TFF3Q07654 80 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 ATP1A1-AS1Q5TC04 95 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 BTNL3Q6UXE8 466 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 Q6ZR03 302 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 GATAD1Q8WUU5 269 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 RPUSD4Q96CM3 377 aaKnown RBP13.89□□□□□ -0.19
SPG11-215ENST00000559193 SNX22Q96L94 193 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 PRDM13Q9H4Q3 707 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.89□□□□□ -0.19
SPG11-215ENST00000559193 COL6A3P12111 3177 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 FABP4P15090 132 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 FGF7P21781 194 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 RPS16P62249 146 aaKnown RBP13.89□□□□□ -0.19
SPG11-215ENST00000559193 ATP6V1FQ16864 119 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 TMEM241Q24JQ0 296 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 KIAA2026Q5HYC2 2103 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 SLC35E4Q6ICL7 350 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 FIP1L1Q6UN15 594 aaKnown RBP13.89□□□□□ -0.19
SPG11-215ENST00000559193 C11orf53Q8IXP5 236 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 KLF14Q8TD94 323 aaPredicted RBP13.89□□□□□ -0.19
SPG11-215ENST00000559193 DTD1Q8TEA8 209 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 GUCD1Q96NT3 240 aa13.89□□□□□ -0.19
SPG11-215ENST00000559193 OOEPA6NGQ2 149 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 PFN1P07737 140 aaKnown RBP13.88□□□□□ -0.19
SPG11-215ENST00000559193 RPL23P62829 140 aaKnown RBP13.88□□□□□ -0.19
SPG11-215ENST00000559193 CATR1Q13166 79 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 OR10G9Q8NGN4 311 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 OR10G7Q8NGN6 311 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 GMPPAQ96IJ6 420 aaPredicted RBP13.88□□□□□ -0.19
SPG11-215ENST00000559193 OBP2BQ9NPH6 170 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 TMEM250H0YL14 139 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 PSMB3P49720 205 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 BSXQ3C1V8 233 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 FFAR4Q5NUL3 377 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 GCNT2Q8N0V5 402 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 OR10A7Q8NGE5 316 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 OR4X1Q8NH49 305 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 MRGPRDQ8TDS7 321 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 FER1L6-AS2Q96M78 137 aa13.88□□□□□ -0.19
SPG11-215ENST00000559193 MRPL37Q9BZE1 423 aaKnown RBP13.88□□□□□ -0.19
SPG11-215ENST00000559193 CLDN14O95500 239 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 HIST1H1BP16401 226 aaKnown RBP13.87□□□□□ -0.19
SPG11-215ENST00000559193 GTF3C1Q12789 2109 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 PFDN5Q99471 154 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 PYGO2Q9BRQ0 406 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 PARLQ9H300 379 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 SRD5A3Q9H8P0 318 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 ZDHHC11Q9H8X9 412 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 TECTAO75443 2155 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 CD59P13987 128 aa13.87□□□□□ -0.19
SPG11-215ENST00000559193 LINC00205P59089 165 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms