RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 Q6ZPA2 131 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 OR5AN1Q8NGI8 311 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 OR8U1Q8NH10 309 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 SETD6Q8TBK2 473 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 FCGR1BQ92637 280 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 DPF1Q92782 380 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 RAB3CQ96E17 227 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 ARHGAP5-AS1Q96IT6 56 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 PECRQ9BY49 303 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 MRPL20Q9BYC9 149 aaKnown RBP7.93□□□□□ -1.14
USP3-207ENST00000558218 OR51J1Q9H342 316 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 KIAA1456Q9P272 454 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 LINC00527Q9UJ94 153 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 TMEM272A0A1B0GTI8 110 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 NUDT19A8MXV4 375 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 CCL24O00175 119 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 ATP6V1G2O95670 118 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 CT45A6P0DMU7 189 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 CT45A5P0DMU8 189 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 CT45A7P0DMV0 189 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 RAB3BP20337 219 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 GADD45AP24522 165 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 MYL9P24844 172 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 PSMB8P28062 276 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 PPIFP30405 207 aaKnown RBP7.92□□□□□ -1.14
USP3-207ENST00000558218 OR3A3P47888 321 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 DCTN2Q13561 401 aaKnown RBP7.92□□□□□ -1.14
USP3-207ENST00000558218 PLAC9Q5JTB6 97 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 UBE2UQ5VVX9 321 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 ETV3LQ6ZN32 361 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 TPRA1Q86W33 373 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 TCTEX1D1Q8N7M0 179 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.92□□□□□ -1.14
USP3-207ENST00000558218 KLHL30-AS1Q8NEE0 82 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 OR4A4PQ8NGN8 299 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 MRAPQ8TCY5 172 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 UBE2E2Q96LR5 201 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 KCTD7Q96MP8 289 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 HSPB9Q9BQS6 159 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 C11orf54Q9H0W9 315 aaPredicted RBP7.92□□□□□ -1.14
USP3-207ENST00000558218 AURKAIP1Q9NWT8 199 aaPredicted RBP7.92□□□□□ -1.14
USP3-207ENST00000558218 ZNF221Q9UK13 617 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 WASHC3Q9Y3C0 194 aa7.92□□□□□ -1.14
USP3-207ENST00000558218 IGHV7-81A0A0B4J1V7 117 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 RAB27BO00194 218 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 RRHO14718 337 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 SCTP09683 121 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 CD3GP09693 182 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 CRIP2P52943 208 aaPredicted RBP7.91□□□□□ -1.14
USP3-207ENST00000558218 CLDN12P56749 244 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 TMEM267Q0VDI3 215 aaPredicted RBP7.91□□□□□ -1.14
USP3-207ENST00000558218 TMEM65Q6PI78 240 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 Q6ZS49 121 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 C5orf24Q7Z6I8 188 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 SPARTQ8N0X7 666 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 OR10R2Q8NGX6 335 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 MYOZ3Q8TDC0 251 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 C4orf3Q8WVX3 66 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 RITA1Q96K30 269 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 KCNK15Q9H427 330 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.91□□□□□ -1.14
USP3-207ENST00000558218 RNF150Q9ULK6 438 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 KCNK7Q9Y2U2 307 aa7.91□□□□□ -1.14
USP3-207ENST00000558218 TRAV41A0A0B4J266 112 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 H0YJW9 148 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 RAMP3O60896 148 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 TMEM127O75204 238 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 PROP1O75360 226 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 SCGNO76038 276 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 SPDEFO95238 335 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 RUNX1Q01196 453 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 RPL39P5Q59GN2 51 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 HES5Q5TA89 166 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 ZNF562Q6V9R5 426 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 PDPNQ86YL7 162 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 MINDY2Q8NBR6 621 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 RAX2Q96IS3 184 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 ABHD14BQ96IU4 210 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 CYYR1Q96J86 154 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 TSNAXQ99598 290 aaKnown RBP7.9□□□□□ -1.14
USP3-207ENST00000558218 HDHD3Q9BSH5 251 aaPredicted RBP7.9□□□□□ -1.14
USP3-207ENST00000558218 RDH8Q9NYR8 311 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 NUBP2Q9Y5Y2 271 aa7.9□□□□□ -1.14
USP3-207ENST00000558218 TRBV6-7A0A0A0MS04 114 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 IGKV1-6A0A0C4DH72 117 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 SHISA3A0PJX4 238 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 NOTOA8MTQ0 251 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 H7C2Y5 167 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 MFNGO00587 321 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 FABP7O15540 132 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 PRB2P02812 416 aaPredicted RBP7.89□□□□□ -1.15
USP3-207ENST00000558218 TFAP2AP05549 437 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 CTXN2P0C2S0 81 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 SLC2A2P11168 524 aaPredicted RBP7.89□□□□□ -1.15
USP3-207ENST00000558218 HIST1H1DP16402 221 aaKnown RBP7.89□□□□□ -1.15
USP3-207ENST00000558218 LGALS7P47929 136 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 RAB9AP51151 201 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 INSL3P51460 131 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 SCAND1P57086 179 aa7.89□□□□□ -1.15
USP3-207ENST00000558218 PITPNAQ00169 270 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms