RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 STX5Q13190 355 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 UAP1Q16222 522 aaPredicted RBP2.35□□□□□ -2.03
PNN-206ENST00000557680 N4BP2L1Q5TBK1 243 aaPredicted RBP2.35□□□□□ -2.03
PNN-206ENST00000557680 ZNF550Q7Z398 422 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 TRAPPC5Q8IUR0 188 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 RPRMLQ8N4K4 120 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 PACRGLQ8N7B6 248 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 UBL4BQ8N7F7 174 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 Q8NAQ8 132 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 CCDC112Q8NEF3 446 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 MFSD8Q8NHS3 518 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 DGCR14Q96DF8 476 aaKnown RBP2.35□□□□□ -2.03
PNN-206ENST00000557680 ANKRD36BP1Q96IX9 119 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 TRIB3Q96RU7 358 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
PNN-206ENST00000557680 TRAV8-1A0A0A6YYK1 113 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 C5orf49A4QMS7 147 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 LINC00862A6NCI5 91 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 GOLGA6L4A6NEF3 574 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 SMIM23A6NLE4 172 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 D6RAR5 112 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 C15orf65H3BRN8 121 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 SLC25A20O43772 301 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 DCTN3O75935 186 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 IGHV3-53P01767 116 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 GUSBP08236 651 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 ZNF22P17026 224 aaPredicted RBP2.34□□□□□ -2.03
PNN-206ENST00000557680 OPRM1P35372 400 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 CEBPGP53567 150 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 EMX1Q04741 257 aaPredicted RBP2.34□□□□□ -2.03
PNN-206ENST00000557680 EBPQ15125 230 aaKnown RBP2.34□□□□□ -2.03
PNN-206ENST00000557680 FAM229BQ4G0N7 80 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 IGFL1Q6UW32 110 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 Q6ZQT7 251 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 C16orf78Q8WTQ4 265 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 HIST1H2BAQ96A08 127 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 UPK3BQ9BT76 320 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 EIF5A2Q9GZV4 153 aaKnown RBP2.34□□□□□ -2.03
PNN-206ENST00000557680 WASHC3Q9Y3C0 194 aa2.34□□□□□ -2.03
PNN-206ENST00000557680 SHANK1Q9Y566 2161 aa2.34□□□□□ -2.04
PNN-206ENST00000557680 SHANK3Q9BYB0 1731 aa2.34□□□□□ -2.04
PNN-206ENST00000557680 TRPM3Q9HCF6 1732 aaPredicted RBP2.34□□□□□ -2.04
PNN-206ENST00000557680 CACNA1SQ13698 1873 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 IGSF23A1L1A6 192 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 GGTLC3B5MD39 225 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 INMT-MINDY4F8WBC2 141 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 CHP2O43745 196 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 STK16O75716 305 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 RPP14O95059 124 aaKnown RBP2.33□□□□□ -2.04
PNN-206ENST00000557680 TNNC2P02585 160 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 HRES1P13985 223 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 MYL12AP19105 171 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 CRYBB3P26998 211 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 TMEM33P57088 247 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 RAB5BP61020 215 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 RPS11P62280 158 aaKnown RBP eCLIP2.33□□□□□ -2.04
PNN-206ENST00000557680 MRPL51Q4U2R6 128 aaKnown RBP2.33□□□□□ -2.04
PNN-206ENST00000557680 SBSNQ6UWP8 590 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 S100A7AQ86SG5 101 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 SLC51BQ86UW2 128 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 NIT1Q86X76 327 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 BAP18Q8IXM2 172 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 ZNF561Q8N587 486 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 ZNF680Q8NEM1 530 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 C1orf64Q8NEQ6 169 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 SLC25A44Q96H78 314 aaPredicted RBP2.33□□□□□ -2.04
PNN-206ENST00000557680 TBX5Q99593 518 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 C1QTNF6Q9BXI9 259 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 EMC3Q9P0I2 261 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 ANAPC10Q9UM13 185 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 SLC22A13Q9Y226 551 aa2.33□□□□□ -2.04
PNN-206ENST00000557680 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.33□□□□□ -2.04
PNN-206ENST00000557680 DSCAML1Q8TD84 2053 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 SEC16AO15027 2179 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 A0A1B0GU33 70 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 C19orf71A6NCJ1 209 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 OR6C70A6NIJ9 312 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 KPNA3O00505 521 aaPredicted RBP2.32□□□□□ -2.04
PNN-206ENST00000557680 CRYGDP07320 174 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 PRR9Q5T870 116 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 H1FOOQ8IZA3 346 aaPredicted RBP2.32□□□□□ -2.04
PNN-206ENST00000557680 UMODL1-AS1Q8N2C9 162 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 EIF4E3Q8N5X7 224 aaKnown RBP2.32□□□□□ -2.04
PNN-206ENST00000557680 DEFB125Q8N687 156 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 OR2T27Q8NH04 317 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 PHOSPHO2Q8TCD6 241 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 KLK6Q92876 244 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 SLC35B4Q969S0 331 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 DIRAS2Q96HU8 199 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 PAIP2Q9BPZ3 127 aaKnown RBP2.32□□□□□ -2.04
PNN-206ENST00000557680 CCDC94Q9BW85 323 aaPredicted RBP2.32□□□□□ -2.04
PNN-206ENST00000557680 PECRQ9BY49 303 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 C11orf1Q9H5F2 150 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 HES4Q9HCC6 221 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 CACNA1DQ01668 2161 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 HECW2Q9P2P5 1572 aa2.32□□□□□ -2.04
PNN-206ENST00000557680 SMIM9A6NGZ8 99 aa2.31□□□□□ -2.04
PNN-206ENST00000557680 CLDN24A6NM45 220 aa2.31□□□□□ -2.04
PNN-206ENST00000557680 CPSF4O95639 269 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms