RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 FAM219AQ8IW50 185 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 OR1S1Q8NH92 325 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 CT45A3Q8NHU0 189 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 RRNAD1Q96FB5 475 aaKnown RBP10.27□□□□□ -0.76
SHMT2-233ENST00000557529 OR5AC2Q9NZP5 309 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 LSM5Q9Y4Y9 91 aaKnown RBP10.27□□□□□ -0.76
SHMT2-233ENST00000557529 POMT1Q9Y6A1 747 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 DSCAML1Q8TD84 2053 aa10.27□□□□□ -0.77
SHMT2-233ENST00000557529 E5RGE8 158 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 K7EPK0 472 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 M0R1X1 148 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 SLC31A2O15432 143 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 BCL2L11O43521 198 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 MMP23AO75900 390 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 LY6HO94772 140 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 IFNA7P01567 189 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 IGKV1-39P01597 117 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 IGKV1D-39P04432 117 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 CCL3L1P16619 93 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 DUTP33316 252 aaKnown RBP10.26□□□□□ -0.77
SHMT2-233ENST00000557529 CDKN1AP38936 164 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 NKX2-1P43699 371 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-233ENST00000557529 TEX261Q6UWH6 196 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 ZNF841Q6ZN19 808 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 SLC25A48Q6ZT89 311 aaKnown RBP10.26□□□□□ -0.77
SHMT2-233ENST00000557529 SLC51BQ86UW2 128 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 FOXRED2Q8IWF2 684 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 SPAG16Q8N0X2 631 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 FAM71E2Q8N5Q1 922 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 C8orf31Q8N9H6 132 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 GPR146Q96CH1 333 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 ADTRPQ96IZ2 230 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 AQP10Q96PS8 301 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 PLEKHA2Q9HB19 425 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 NSG2Q9Y328 171 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 PRELID3BQ9Y3B1 194 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 U3KQ87 197 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 DOPEY1Q5JWR5 2465 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 LINC00473A8K010 186 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 C17orf98A8MV24 154 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 RBFOX2O43251 390 aaKnown RBP eCLIP10.26□□□□□ -0.77
SHMT2-233ENST00000557529 IGHV3-7P01780 117 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 PVALBP20472 110 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-233ENST00000557529 GPR6P46095 362 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-233ENST00000557529 DLX6P56179 175 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 NDUFA5Q16718 116 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 C8orf46Q8TAG6 207 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 LEAP2Q969E1 77 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 S1PR3Q99500 378 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 MMP24Q9Y5R2 645 aa10.26□□□□□ -0.77
SHMT2-233ENST00000557529 ZFYVE26Q68DK2 2539 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 EPG5Q9HCE0 2579 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 SAA2-SAA4A0A096LPE2 208 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 OVOL3O00110 214 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 PROP1O75360 226 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 PITX3O75364 302 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 IGKV1-5P01602 117 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 RBP4P02753 201 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 RNF224P0DH78 156 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 SAA2P0DJI9 122 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-233ENST00000557529 MMP9P14780 707 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 EPHA1P21709 976 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 P2RY1P47900 373 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 THBS3P49746 956 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 GNG10P50151 68 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 UBA52P62987 128 aaKnown RBP10.25□□□□□ -0.77
SHMT2-233ENST00000557529 ID3Q02535 119 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 RPL39P5Q59GN2 51 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 WDR25Q64LD2 544 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-233ENST00000557529 NCR3LG1Q68D85 454 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 LYG1Q8N1E2 194 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 LINC00311Q8N616 119 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 ZNF680Q8NEM1 530 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 ARPC5LQ9BPX5 153 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 PATZ1Q9HBE1 687 aaKnown RBP10.25□□□□□ -0.77
SHMT2-233ENST00000557529 ZC4H2Q9NQZ6 224 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 COA4Q9NYJ1 87 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 ITGB1BP2Q9UKP3 347 aa10.25□□□□□ -0.77
SHMT2-233ENST00000557529 A0A087X0M5 115 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 A0A0G2JRQ6 117 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 A0A1B0GX30 115 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 hCG_1809904A0A1W2PP81 198 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 A0A1W2PPE2 198 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 A0A1W2PPE3 182 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 A0A1W2PR64 198 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 A0A1W2PRV1 198 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 F5H0A9 414 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-233ENST00000557529 WRBO00258 174 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 RAMP3O60896 148 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 S1PR2O95136 353 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 HPRT1P00492 218 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 RPL12P30050 165 aaKnown RBP10.24□□□□□ -0.77
SHMT2-233ENST00000557529 BRWD1-AS2P59051 145 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 ZNF816Q0VGE8 651 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-233ENST00000557529 OR2B11Q5JQS5 317 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 UTF1Q5T230 341 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 GPR157Q5UAW9 335 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 ODF3L1Q8IXM7 274 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 ZNF596Q8TC21 504 aa10.24□□□□□ -0.77
SHMT2-233ENST00000557529 ZNF251Q9BRH9 671 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms