RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 LIPKQ5VXJ0 399 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 ZNF562Q6V9R5 426 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 PPP1R27Q86WC6 154 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 ABHD5Q8WTS1 349 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 UFD1Q92890 307 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 TMEM203Q969S6 136 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 PTX4Q96A99 478 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 HDHD3Q9BSH5 251 aaPredicted RBP12.29□□□□□ -0.44
TUBB3-213ENST00000557262 PLGRKTQ9HBL7 147 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 Q9N2K0 584 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 TPSG1Q9NRR2 321 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 OR1A1Q9P1Q5 309 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 A3GALT2U3KPV4 340 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 SLC17A2O00624 439 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 SAP30O75446 220 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 LGALS1P09382 135 aaKnown RBP12.28□□□□□ -0.44
TUBB3-213ENST00000557262 SCTP09683 121 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 SLURP1P55000 103 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 HLA-DRB3P79483 266 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 TPBGQ13641 420 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 PSG5Q15238 335 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 P2RY14Q15391 338 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 ACTBL2Q562R1 376 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 PYHIN1Q6K0P9 492 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 UNQ5815/PRO19632Q6UWF5 114 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 TMEM91Q6ZNR0 172 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 CASTOR1Q8WTX7 329 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 CLCC1Q96S66 551 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 ISYNA1Q9NPH2 558 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 METTL1Q9UBP6 276 aaKnown RBP12.28□□□□□ -0.44
TUBB3-213ENST00000557262 ZNF221Q9UK13 617 aa12.28□□□□□ -0.44
TUBB3-213ENST00000557262 AK6Q9Y3D8 172 aaKnown RBP12.28□□□□□ -0.44
TUBB3-213ENST00000557262 FOXI3A8MTJ6 420 aaPredicted RBP12.27□□□□□ -0.45
TUBB3-213ENST00000557262 HSPB1P04792 205 aaKnown RBP12.27□□□□□ -0.45
TUBB3-213ENST00000557262 CPEP16870 476 aa12.27□□□□□ -0.45
TUBB3-213ENST00000557262 CD40LGP29965 261 aa12.27□□□□□ -0.45
TUBB3-213ENST00000557262 VEGFCP49767 419 aa12.27□□□□□ -0.45
TUBB3-213ENST00000557262 RPS16P62249 146 aaKnown RBP12.27□□□□□ -0.45
TUBB3-213ENST00000557262 TRAM1Q15629 374 aa12.27□□□□□ -0.45
TUBB3-213ENST00000557262 DRAXINQ8NBI3 349 aaPredicted RBP12.27□□□□□ -0.45
TUBB3-213ENST00000557262 LFNGQ8NES3 379 aa12.27□□□□□ -0.45
TUBB3-213ENST00000557262 FLYWCH2Q96CP2 140 aaKnown RBP12.27□□□□□ -0.45
TUBB3-213ENST00000557262 MS4A10Q96PG2 267 aa12.27□□□□□ -0.45
TUBB3-213ENST00000557262 TSNAXQ99598 290 aaKnown RBP12.27□□□□□ -0.45
TUBB3-213ENST00000557262 GFI1Q99684 422 aa12.27□□□□□ -0.45
TUBB3-213ENST00000557262 FAM103A1Q9BTL3 118 aaKnown RBP12.27□□□□□ -0.45
TUBB3-213ENST00000557262 GAB2Q9UQC2 676 aa12.27□□□□□ -0.45
TUBB3-213ENST00000557262 TPRKBQ9Y3C4 175 aa12.27□□□□□ -0.45
TUBB3-213ENST00000557262 SORL1Q92673 2214 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 A0A087WW49 117 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 ARL6IP5O75915 188 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 HSMCR30P0CW71 290 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 SPNP16150 400 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 RANBP1P43487 201 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 RAB11BQ15907 218 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 C2orf76Q3KRA6 126 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 ACSM6Q6P461 480 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 ZNF383Q8NA42 475 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 ARHGAP5-AS1Q96IT6 56 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 RHOVQ96L33 236 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 CMSS1Q9BQ75 279 aaKnown RBP12.26□□□□□ -0.45
TUBB3-213ENST00000557262 PECRQ9BY49 303 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 DUSP21Q9H596 190 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 SLA2Q9H6Q3 261 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 C12orf4Q9NQ89 552 aa12.26□□□□□ -0.45
TUBB3-213ENST00000557262 TRDCB7Z8K6 153 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 C3orf84H3BNL1 204 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 ARPC1BO15143 372 aaKnown RBP12.25□□□□□ -0.45
TUBB3-213ENST00000557262 SPDEFO95238 335 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 CA2P00918 260 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 IGHV3-11P01762 117 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 IGKV1-16P04430 117 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 TFAP2AP05549 437 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 OR8U9P0C7N5 309 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 PSMA1P25786 263 aaKnown RBP12.25□□□□□ -0.45
TUBB3-213ENST00000557262 LINC00205P59089 165 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 RPS25P62851 125 aaKnown RBP12.25□□□□□ -0.45
TUBB3-213ENST00000557262 OR56B1Q8NGI3 324 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 OR6Q1Q8NGQ2 317 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 FAM3DQ96BQ1 224 aa12.25□□□□□ -0.45
TUBB3-213ENST00000557262 IGKV1-6A0A0C4DH72 117 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 SNRPBP14678 240 aaKnown RBP12.24□□□□□ -0.45
TUBB3-213ENST00000557262 GP9P14770 177 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 PSMD7P51665 324 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 TPPP2P59282 170 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 MLLT11Q13015 90 aaPredicted RBP12.24□□□□□ -0.45
TUBB3-213ENST00000557262 FXYD3Q14802 87 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 PDPNQ86YL7 162 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 SBSPONQ8IVN8 264 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.24□□□□□ -0.45
TUBB3-213ENST00000557262 ARPC1AQ92747 370 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 OR4C12Q96R67 309 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 RDH8Q9NYR8 311 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 V9GY05 133 aa12.24□□□□□ -0.45
TUBB3-213ENST00000557262 HUWE1Q7Z6Z7 4374 aaKnown RBP12.23□□□□□ -0.45
TUBB3-213ENST00000557262 DENRO43583 198 aaKnown RBP12.23□□□□□ -0.45
TUBB3-213ENST00000557262 RGS10O43665 173 aa12.23□□□□□ -0.45
TUBB3-213ENST00000557262 APOA2P02652 100 aa12.23□□□□□ -0.45
TUBB3-213ENST00000557262 TRGV3P03979 118 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms