RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ST6GALNAC5Q9BVH7 336 aa7.68□□□□□ -1.18
SRP54-210ENST00000556380 MRPL20Q9BYC9 149 aaKnown RBP7.68□□□□□ -1.18
SRP54-210ENST00000556380 PRSS22Q9GZN4 317 aa7.68□□□□□ -1.18
SRP54-210ENST00000556380 GHITMQ9H3K2 345 aa7.68□□□□□ -1.18
SRP54-210ENST00000556380 PIPOXQ9P0Z9 390 aa7.68□□□□□ -1.18
SRP54-210ENST00000556380 COMMD3Q9UBI1 195 aa7.68□□□□□ -1.18
SRP54-210ENST00000556380 GAB2Q9UQC2 676 aa7.68□□□□□ -1.18
SRP54-210ENST00000556380 CEPT1Q9Y6K0 416 aa7.68□□□□□ -1.18
SRP54-210ENST00000556380 RAB29O14966 203 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 BET1O15155 118 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 CTXN2P0C2S0 81 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 CT45A6P0DMU7 189 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 CT45A5P0DMU8 189 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 CT45A7P0DMV0 189 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 ELK1P19419 428 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 TAS2R20P59543 309 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 SRSF4Q08170 494 aaKnown RBP7.67□□□□□ -1.18
SRP54-210ENST00000556380 LSAMPQ13449 338 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 HNF4GQ14541 408 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 RPL39P5Q59GN2 51 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 CNIH2Q6PI25 160 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 C11orf88Q6PI97 169 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 HOGA1Q86XE5 327 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 H1FOOQ8IZA3 346 aaPredicted RBP7.67□□□□□ -1.18
SRP54-210ENST00000556380 GVQW1Q8N7I0 195 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 OR2T10Q8NGZ9 312 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 AP3S1Q92572 193 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 PHF21AQ96BD5 680 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 C5orf30Q96GV9 206 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 RITA1Q96K30 269 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 CITED1Q99966 193 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 WNT10AQ9GZT5 417 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 ANXA10Q9UJ72 324 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 RNF150Q9ULK6 438 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 ANAPC10Q9UM13 185 aa7.67□□□□□ -1.18
SRP54-210ENST00000556380 SH2D7A6NKC9 451 aaPredicted RBP7.66□□□□□ -1.18
SRP54-210ENST00000556380 H3BMQ9 156 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 M0QZK8 103 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 FGF16O43320 207 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 HPGDSO60760 199 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 NOL3O60936 208 aaKnown RBP7.66□□□□□ -1.18
SRP54-210ENST00000556380 MOSP00540 346 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 OR8U9P0C7N5 309 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 TMEM11P17152 192 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 LINC00205P59089 165 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 HES1Q14469 280 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 TMEM69Q5SWH9 247 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 C5orf56Q8N8D9 126 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 OR5AN1Q8NGI8 311 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 OR8U1Q8NH10 309 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 OR10J5Q8NHC4 309 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 OR2T6Q8NHC8 308 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 DYNC2LI1Q8TCX1 351 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 SNAPC3Q92966 411 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 ISOC1Q96CN7 298 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 AKR1E2Q96JD6 320 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 S1PR3Q99500 378 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 RBM38Q9H0Z9 239 aaKnown RBP7.66□□□□□ -1.18
SRP54-210ENST00000556380 MIXL1Q9H2W2 232 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 MOB4Q9Y3A3 225 aa7.66□□□□□ -1.18
SRP54-210ENST00000556380 NOTCH1P46531 2555 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 H0YJW9 148 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 CTDSP2O14595 271 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 TUSC2O75896 110 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 TPPPO94811 219 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 LPLP06858 475 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 NAT1P18440 290 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 CBX5P45973 191 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 F2RL1P55085 397 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 ABCA11PQ4W5N1 156 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 MZT2AQ6P582 158 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 Q8N9W7 124 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.65□□□□□ -1.18
SRP54-210ENST00000556380 BEST4Q8NFU0 473 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 OR8H1Q8NGG4 311 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 GPX8Q8TED1 209 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 SDHAF2Q9NX18 166 aa7.65□□□□□ -1.18
SRP54-210ENST00000556380 SMIM31A0A1B0GVY4 71 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 ZNF701M0R085 212 aaPredicted RBP7.64□□□□□ -1.19
SRP54-210ENST00000556380 PAX4O43316 350 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 IGLV2-14P01704 120 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 NFYAP23511 347 aaPredicted RBP7.64□□□□□ -1.19
SRP54-210ENST00000556380 PRSS3P35030 304 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 SOX6P35712 828 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 GPR12P47775 334 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 TMEM95Q3KNT9 176 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 GLDNQ6ZMI3 551 aaPredicted RBP7.64□□□□□ -1.19
SRP54-210ENST00000556380 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 LYSMD2Q8IV50 215 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 FAM71E2Q8N5Q1 922 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 KLHDC1Q8N7A1 406 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 ZNF383Q8NA42 475 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 DRAXINQ8NBI3 349 aaPredicted RBP7.64□□□□□ -1.19
SRP54-210ENST00000556380 NPBQ8NG41 125 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 GINS4Q9BRT9 223 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 SLIRPQ9GZT3 109 aaKnown RBP7.64□□□□□ -1.19
SRP54-210ENST00000556380 NXF2Q9GZY0 626 aaKnown RBP7.64□□□□□ -1.19
SRP54-210ENST00000556380 CCDC59Q9P031 241 aaKnown RBP7.64□□□□□ -1.19
SRP54-210ENST00000556380 ZNF221Q9UK13 617 aa7.64□□□□□ -1.19
SRP54-210ENST00000556380 ADAM30Q9UKF2 790 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms