RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ATP6V1FQ16864 119 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF791Q3KP31 576 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-209ENST00000556353 HSD17B12Q53GQ0 312 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SYT6Q5T7P8 510 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SMARCD3Q6STE5 483 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 LINC00299Q6ZSB3 139 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SSX6Q7RTT6 188 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 CENPSQ8N2Z9 138 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 ARRDC1Q8N5I2 433 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 GDPD1Q8N9F7 314 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 ACOT4Q8N9L9 421 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 OR10K1Q8NGX5 313 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SFT2D1Q8WV19 159 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 ASB17Q8WXJ9 295 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 DNAJC9Q8WXX5 260 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 GHSRQ92847 366 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 IL4I1Q96RQ9 567 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 GPR22Q99680 433 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 NDUFAF3Q9BU61 184 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 OR8D2Q9GZM6 311 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 ACTR6Q9GZN1 396 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 TXNIPQ9H3M7 391 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 RHOJQ9H4E5 214 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 PRTFDC1Q9NRG1 225 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 SPANXB1Q9NS25 103 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-209ENST00000556353 P2RX2Q9UBL9 471 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 GHRLQ9UBU3 117 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 PYCARDQ9ULZ3 195 aa3.1□□□□□ -1.91
PRPF39-209ENST00000556353 KLF13Q9Y2Y9 288 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-209ENST00000556353 A0A0A6YYD5 115 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 PRSS37A4D1T9 235 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 OR6C6A6NF89 314 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 FAM159BA6NKW6 160 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 LEUTXA8MZ59 168 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 PPP5D1E7EU14 171 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 C11orf98E9PRG8 122 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 M0R3G1 203 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 DCTN6O00399 190 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 TP53I11O14683 189 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 RAD51CO43502 376 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 AIREO43918 545 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 HPGDSO60760 199 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 CA11O75493 328 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 SLC22A5O76082 557 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 RCBTB2O95199 551 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 CLDN9O95484 217 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 AIFM1O95831 613 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 PDYNP01213 254 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 MT-ND4P03905 459 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 ALDOBP05062 364 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 BCHEP06276 602 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 BPGMP07738 259 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 CST2P09228 141 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 HIST1H2AGP0C0S8 130 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 CT62P0C5K7 136 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 MYL2P10916 166 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF25P17030 456 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 GZMHP20718 246 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 HIST1H1TP22492 207 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 PTGDSP41222 190 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF136P52737 540 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 FBXW4P57775 412 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 STXBP1P61764 594 aaKnown RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 PKIAP61925 76 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 RPL32P62910 135 aaKnown RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 MLLT11Q13015 90 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 TPBGQ13641 420 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 OXA1LQ15070 435 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 EBPQ15125 230 aaKnown RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 MRPL23Q16540 153 aaKnown RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 ZSWIM7Q19AV6 140 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 KRTAP21-3Q3LHN1 58 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 ACSF3Q4G176 576 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 LINC01620Q4KN68 170 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 PABPC1L2AQ5JQF8 200 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 FAM71E1Q6IPT2 247 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 HAGHLQ6PII5 290 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 CD200R1LQ6Q8B3 271 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 ZNF621Q6ZSS3 439 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 SKA3Q8IX90 412 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 OR6V1Q8N148 313 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 LRRC25Q8N386 305 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 JAGN1Q8N5M9 183 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 EIF4E3Q8N5X7 224 aaKnown RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 MORN4Q8NDC4 146 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 WFDC11Q8NEX6 87 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 OR5AU1Q8NGC0 362 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 OR4A4PQ8NGN8 299 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 OR9Q1Q8NGQ5 310 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 OR52E5Q8NH55 327 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 FAM110BQ8TC76 370 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 ABHD3Q8WU67 409 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 RPL3LQ92901 407 aaKnown RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 TM4SF18Q96CE8 201 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 C10orf35Q96D05 121 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 MRPL53Q96EL3 112 aaKnown RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 AMDHD1Q96NU7 426 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 KCNA7Q96RP8 456 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 CNN2Q99439 309 aaKnown RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 SLC6A7Q99884 636 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms