RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 SELENOIQ9C0D9 397 aa8.17□□□□□ -1.1
SYNE2-221ENST00000556342 RANGRFQ9HD47 186 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-221ENST00000556342 CKLFQ9UBR5 152 aa8.17□□□□□ -1.1
SYNE2-221ENST00000556342 RPL36Q9Y3U8 105 aaKnown RBP8.17□□□□□ -1.1
SYNE2-221ENST00000556342 OR5H14A6NHG9 310 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 H0YJW9 148 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 RAB29O14966 203 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 OGG1O15527 345 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 PDCD6O75340 191 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 TRGV3P03979 118 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 CT45A6P0DMU7 189 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 CT45A5P0DMU8 189 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 CT45A7P0DMV0 189 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 ETV1P50549 477 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 HMGN3Q15651 99 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 RPL39P5Q59GN2 51 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 C6orf141Q5SZD1 244 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 DMKNQ6E0U4 476 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-221ENST00000556342 ZNF562Q6V9R5 426 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 GLDNQ6ZMI3 551 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-221ENST00000556342 IL34Q6ZMJ4 242 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 GTSCR1Q86UQ5 136 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 CBR4Q8N4T8 237 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 OR9G4Q8NGQ1 327 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 PYDC1Q8WXC3 89 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 GHSRQ92847 366 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 CLCC1Q96S66 551 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 THAP7Q9BT49 309 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-221ENST00000556342 TMED9Q9BVK6 235 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 KRTAP17-1Q9BYP8 105 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 TUBA4BQ9H853 241 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 RETNQ9HD89 108 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 FGF20Q9NP95 211 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-221ENST00000556342 PIPOXQ9P0Z9 390 aa8.16□□□□□ -1.1
SYNE2-221ENST00000556342 ANKRD34BA5PLL1 514 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 H7C2Y5 167 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 CRTAPO75718 401 aaPredicted RBP8.15□□□□□ -1.1
SYNE2-221ENST00000556342 RBBP9O75884 186 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 BAG2O95816 211 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 LALBAP00709 142 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 CA2P00918 260 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 MC5RP33032 325 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 RASSF2P50749 326 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 RPS11P62280 158 aaKnown RBP eCLIP8.15□□□□□ -1.1
SYNE2-221ENST00000556342 KLF5Q13887 457 aaPredicted RBP8.15□□□□□ -1.1
SYNE2-221ENST00000556342 MOGAT2Q3SYC2 334 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 Q499Y3 187 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 YIF1BQ5BJH7 314 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 TMPRSS11AQ6ZMR5 421 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 OR5AN1Q8NGI8 311 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 APH1BQ8WW43 257 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 OR14A2Q96R54 314 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 RNF5Q99942 180 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 BABAM2Q9NXR7 383 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 METTL1Q9UBP6 276 aaKnown RBP8.15□□□□□ -1.1
SYNE2-221ENST00000556342 STEAP1Q9UHE8 339 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 SLC23A1Q9UHI7 598 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 WASHC3Q9Y3C0 194 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 LRRC42Q9Y546 428 aa8.15□□□□□ -1.1
SYNE2-221ENST00000556342 TRBV5-7A0A0A0MS05 114 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 A0A0G2JLM5 398 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 C13orf42A0A1B0GVH6 325 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 H3BUA1 57 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 SLC22A1O15245 554 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 DCKP27707 260 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 SYNJ2BPP57105 145 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 PSG5Q15238 335 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 LCN12Q6JVE5 192 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 LINC00322Q6ZN03 302 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-221ENST00000556342 CDH26Q8IXH8 852 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 Q8N402 240 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 POC5Q8NA72 575 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 GRPEL2Q8TAA5 225 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 IL1F10Q8WWZ1 152 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 FAM46BQ96A09 425 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 PGLYRP3Q96LB9 341 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 FAM110AQ9BQ89 295 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 PARP12Q9H0J9 701 aaKnown RBP8.14□□□□□ -1.11
SYNE2-221ENST00000556342 HIPK2Q9H2X6 1198 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 ZNF355PQ9NSJ1 428 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 AP5S1Q9NUS5 200 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 ABRACLQ9P1F3 81 aa8.14□□□□□ -1.11
SYNE2-221ENST00000556342 LOC100130705A0A1B0GUX0 176 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 A0A1W2PPK0 400 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 H3BNX3 289 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 CIB2O75838 187 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 SPDEFO95238 335 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 FXYD3Q14802 87 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 SMN1Q16637 294 aaKnown RBP8.13□□□□□ -1.11
SYNE2-221ENST00000556342 ZFP41Q8N8Y5 198 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 OR5T1Q8NG75 326 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 ABHD14BQ96IU4 210 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 NEDD4LQ96PU5 975 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 TSNAXQ99598 290 aaKnown RBP8.13□□□□□ -1.11
SYNE2-221ENST00000556342 SULT4A1Q9BR01 284 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 SIGLEC8Q9NYZ4 499 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 CEPT1Q9Y6K0 416 aa8.13□□□□□ -1.11
SYNE2-221ENST00000556342 IZUMO1RA6ND01 250 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 NPIPB6E9PJ23 425 aa8.12□□□□□ -1.11
SYNE2-221ENST00000556342 ITGB1BP1O14713 200 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms