RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ZNF140P52738 457 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-218ENST00000556256 UBE2G2P60604 165 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 SMAGPQ0VAQ4 97 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 TPRXLQ17RH7 258 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-218ENST00000556256 DNM1P34Q6PK57 102 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 FAM19A5Q7Z5A7 132 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-218ENST00000556256 CD302Q8IX05 232 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 NATD1Q8N6N6 113 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 CCDC112Q8NEF3 446 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 OR10D3Q8NH80 312 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 DNAJB3Q8WWF6 145 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 ZNF514Q96K75 400 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-218ENST00000556256 MGLLQ99685 303 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 MROQ9BYG7 248 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 NDEL1Q9GZM8 345 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 SLC22A4Q9H015 551 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 IMP3Q9NV31 184 aaKnown RBP1.01□□□□□ -2.25
SCFD1-218ENST00000556256 PRO2289Q9P1D8 64 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 SNX12Q9UMY4 172 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 FAM215AQ9Y5M1 114 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 ICE1Q9Y2F5 2266 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 COL11A1P12107 1806 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-218ENST00000556256 MYO9BQ13459 2157 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 DSCAML1Q8TD84 2053 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 OTOFQ9HC10 1997 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 A0A0G2JQZ4 141 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 TINCRA0A1B0GVN0 87 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 GRIFINA4D1Z8 144 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 OR5K4A6NMS3 321 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 MRASO14807 208 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 AZIN1O14977 448 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 ATP8B1O43520 1251 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 ATP6V1G2O95670 118 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 LINC00614P0C842 121 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 PET100P0DJ07 73 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 CD36P16671 472 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 CASQ1P31415 396 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 CD79BP40259 229 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 CA7P43166 264 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 TAS2R45P59539 299 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 HPCAP84074 193 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 PDPK2PQ6A1A2 396 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 C2orf91Q6ZV80 131 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 ATP5L2Q7Z4Y8 100 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 OR2D3Q8NGH3 330 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 SLC37A2Q8TED4 501 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 CPNE2Q96FN4 548 aaPredicted RBP1□□□□□ -2.25
SCFD1-218ENST00000556256 PECRQ9BY49 303 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 MS4A6AQ9H2W1 248 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 KLK5Q9Y337 293 aaPredicted RBP1□□□□□ -2.25
SCFD1-218ENST00000556256 CACNA1SQ13698 1873 aa1□□□□□ -2.25
SCFD1-218ENST00000556256 A0A1W2PP64 1363 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 PIK3R4Q99570 1358 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 TEX50A0A1B0GTY4 177 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 TMEM235A6NFC5 223 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 C11orf86A6NJI1 115 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 FNDC10F2Z333 226 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 H3BRN7 92 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 UBFD1O14562 309 aaKnown RBP0.99□□□□□ -2.25
SCFD1-218ENST00000556256 ITGB1BP1O14713 200 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 GNRH2O43555 120 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 HPGDSO60760 199 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 PRB1P04280 392 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 CXCL2P19875 107 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 CXCL3P19876 107 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 CD24P25063 80 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 SERPINB10P48595 397 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 SKP1P63208 163 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 FABP5Q01469 135 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 DNAL1Q4LDG9 190 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 CCDC121Q6ZUS5 278 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 FUNDC1Q8IVP5 155 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 C1orf174Q8IYL3 243 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 CLDND2Q8NHS1 167 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 Q8WTZ3 238 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 ASB13Q8WXK3 278 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 PACRGQ96M98 296 aaPredicted RBP0.99□□□□□ -2.25
SCFD1-218ENST00000556256 C7orf50Q9BRJ6 194 aaKnown RBP0.99□□□□□ -2.25
SCFD1-218ENST00000556256 PLXNA3P51805 1871 aa0.99□□□□□ -2.25
SCFD1-218ENST00000556256 TRPM6Q9BX84 2022 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 TRAV8-1A0A0A6YYK1 113 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 MDFIC2A0A1B0GVS7 189 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 OR11H12B2RN74 326 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 M0R381 172 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 GSTZ1O43708 216 aaPredicted RBP0.98□□□□□ -2.25
SCFD1-218ENST00000556256 STX10O60499 249 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 NDUFB2O95178 105 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 PSMG1O95456 288 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 MT-CO2P00403 227 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 IGHV1-69P01742 117 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 OCMP0CE72 109 aaPredicted RBP0.98□□□□□ -2.25
SCFD1-218ENST00000556256 ZNF728P0DKX0 622 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 XCL1P47992 114 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 RPS24P62847 133 aaKnown RBP0.98□□□□□ -2.25
SCFD1-218ENST00000556256 EBPQ15125 230 aaKnown RBP0.98□□□□□ -2.25
SCFD1-218ENST00000556256 LGALS9BQ3B8N2 356 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 AMTNQ6UX39 209 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 ZNF283Q8N7M2 679 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 CNEP1R1Q8N9A8 125 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms