RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 KRASP01116 189 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 OPN1MWP04001 364 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 CXCL1P09341 107 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 OPN1MW2P0DN77 364 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 OPN1MW3P0DN78 364 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 OR3A1P47881 315 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 PSMB3P49720 205 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 PMS2P11Q13670 270 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 TRIP6Q15654 476 aaKnown RBP5.89□□□□□ -1.47
TDP1-213ENST00000555880 ZNF726P1Q15940 193 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 IGFBP7Q16270 282 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 HES3Q5TGS1 186 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 FAM90A2PQ658T7 463 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 SLC35E4Q6ICL7 350 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 DHRS13Q6UX07 377 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 TMEM14EPQ6UXP3 125 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 HAPLN4Q86UW8 402 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 ZNF808Q8N4W9 903 aaPredicted RBP5.89□□□□□ -1.47
TDP1-213ENST00000555880 ZNF709Q8N972 641 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 OR1L1Q8NH94 360 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 TAAR6Q96RI8 345 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 SMIM7Q9BQ49 75 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 TMEM147Q9BVK8 224 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 VSIRQ9H7M9 311 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 DOK5Q9P104 306 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 DIDO1Q9BTC0 2240 aaKnown RBP5.89□□□□□ -1.47
TDP1-213ENST00000555880 CHD3Q12873 2000 aaKnown RBP5.89□□□□□ -1.47
TDP1-213ENST00000555880 PRRC2CQ9Y520 2896 aaKnown RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 IGHV3-64DA0A0J9YX35 117 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 LRRC30A6NM36 301 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 LINC00587B1AMM8 73 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 C12orf77C9JDV5 145 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST1H2BKO60814 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 LYZL6O75951 148 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HBZP02008 142 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST1H2BJP06899 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 IGHV1-2P23083 117 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST1H2BOP23527 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST1H2BBP33778 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 G6PCP35575 357 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 RND2P52198 227 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST1H2BDP58876 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 ERVS71-1P61550 626 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST1H2BCP62807 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 MEF2BQ02080 365 aaPredicted RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 ZNF816Q0VGE8 651 aaPredicted RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 PSG7Q13046 419 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST2H2BEQ16778 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 SMIM21Q3B7S5 101 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 OR2B11Q5JQS5 317 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 Q6ZT83 130 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 H2BFWTQ7Z2G1 175 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 MYPOPQ86VE0 399 aaPredicted RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 OR10P1Q8NGE3 313 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 KLF14Q8TD94 323 aaPredicted RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 CA5BP1Q8WTZ4 195 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST1H2BHQ93079 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST1H2BNQ99877 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HIST1H2BMQ99879 126 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 CXXC4Q9H2H0 198 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 ZDHHC11Q9H8X9 412 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HES4Q9HCC6 221 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 SDF2L1Q9HCN8 221 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 MANBALQ9NQG1 85 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 NAT8Q9UHE5 227 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 TINAGQ9UJW2 476 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 USF3Q68DE3 2245 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 CTXND1A0A1B0GTU2 59 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 C17orf112F2Z3M2 114 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 TMEM250H0YL14 139 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 TIMM8AO60220 97 aaPredicted RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 RAMP3O60896 148 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 CLDN14O95500 239 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 TRGC2P03986 189 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 COX5AP20674 150 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 FGF7P21781 194 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 TUBG1P23258 451 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 GABRA2P47869 451 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 CEBPDP49716 269 aaPredicted RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 AESQ08117 197 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 MZT1Q08AG7 82 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 ADIRFQ15847 76 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 TMEM241Q24JQ0 296 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 ALKBH6Q3KRA9 238 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 NCR3LG1Q68D85 454 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 TRAT1Q6PIZ9 186 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 FAM214BQ7L5A3 538 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 SSX7Q7RTT5 188 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 GCNT2Q8N0V5 402 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 CNEP1R1Q8N9A8 125 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 OR52L2PQ8NGH6 319 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 DTD1Q8TEA8 209 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 TRIB1Q96RU8 372 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 HSD17B10Q99714 261 aaKnown RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 AGMATQ9BSE5 352 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 GGACTQ9BVM4 153 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 ACTR3CQ9C0K3 210 aaPredicted RBP5.88□□□□□ -1.47
TDP1-213ENST00000555880 TUBG2Q9NRH3 451 aa5.88□□□□□ -1.47
TDP1-213ENST00000555880 GPR179Q6PRD1 2367 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms